Trichormus variabilis: Ava_4794
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Entry
Ava_4794 CDS
T00277
Name
(GenBank) phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ava
Trichormus variabilis
Pathway
ava00906
Carotenoid biosynthesis
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Ava_4794
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ava01006
]
Ava_4794
Enzymes [BR:
ava01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Ava_4794
Prenyltransferases [BR:
ava01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Ava_4794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ABA24391
UniProt:
Q3M3P5
LinkDB
All DBs
Position
complement(6024730..6025662)
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AA seq
310 aa
AA seq
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MLQLPDSPPRMKTLVSVDESYKLCRHLTAKYAKTFYLGTLLMSPAKRQAIWAIYAWCRRT
DELVDGPASAITTPETLDLWEQHLEAMFAGHPKENYDVALVDAIQRFNLDIQPFRDMIAG
QRMDLHRSRYQTFEELYLYCYRVAGTVGLMSTAVMEVDNTTNTAPWHQSKPLYIPTQEAI
ALGIANQLTNILRDVGEDARRGRIYIPLEDLARFNYTEQDFCNGVVDERWRSLMRFQIDR
ARQFYTEAEKGITHLAPDARWPVWAASMLYGQILDVIERNDYDVFSQRAYVPQWKKLRTL
PIAWMRSQVL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaactgcctgattcccccccgcgcatgaaaacgctggtctctgtagacgagtca
tataaactttgtcggcatctcacagccaagtatgccaaaaccttttacttgggtacattg
ctgatgagtccggcaaagcgccaagctatctgggcaatttacgcctggtgtcgccgtaca
gatgaattagtggacgggcccgcatccgccattactacgccagaaaccctagacctatgg
gagcagcatctggaagcgatgtttgcgggacaccccaaagaaaattacgacgtagccttg
gtggacgcaatccaacgctttaatctagacattcaaccctttcgggacatgattgctgga
cagcgcatggacttacatcgtagccgctaccaaacctttgaggagttatacctctactgt
taccgcgtcgctgggactgtagggttaatgtcaacagccgtgatggaggtagacaacacc
accaacacagcaccttggcatcaaagcaagccactatatattcccacacaagaagcgatc
gccttaggtattgccaatcaacttaccaacattctgcgggatgttggtgaagatgcccga
cgaggacgaatttacattcctctggaagatttagcacgatttaactacaccgagcaagac
ttctgcaacggcgttgtagatgagcgctggcgctccctcatgcgctttcaaatagataga
gcgcggcaattctacaccgaagcagaaaagggcattactcacctggcccccgatgctcgt
tggccagtgtgggcggcttctatgttatacggtcaaattttagatgtgattgaacgcaac
gattacgatgtcttcagtcaacgcgcttacgtcccccaatggaaaaagttacgcacctta
cccatagcttggatgcgatcgcaagttctctaa
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