Trichormus variabilis: Ava_4831
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Entry
Ava_4831 CDS
T00277
Name
(GenBank) isocitrate dehydrogenase (NADP)
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ava
Trichormus variabilis
Pathway
ava00020
Citrate cycle (TCA cycle)
ava00480
Glutathione metabolism
ava00720
Other carbon fixation pathways
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01120
Microbial metabolism in diverse environments
ava01200
Carbon metabolism
ava01210
2-Oxocarboxylic acid metabolism
ava01230
Biosynthesis of amino acids
ava04146
Peroxisome
Module
ava_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Ava_4831
09102 Energy metabolism
00720 Other carbon fixation pathways
Ava_4831
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Ava_4831
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Ava_4831
Enzymes [BR:
ava01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Ava_4831
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
ABA24428
UniProt:
Q3M3K8
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All DBs
Position
6069341..6070762
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AA seq
473 aa
AA seq
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MYNKITPPTTGEKITFKNGEPVVPDNPIIPFIRGDGTGIDIWPATEKVLDAAVAKAYQGK
RKISWFKIYAGDEACDLYGTYQYLPEDTLTAIREYGVAIKGPLTTPVGGGIRSLNVALRQ
IFDLYACVRPCRYYAGTPSPHKNPEKLDVIVYRENTEDIYLGIEWKQGSEIGDRLISILN
KELIPATPEHGKKQIPLDAGIGIKPISKTGSQRLVRRAIKHALTLPKHKQQVTLVHKGNI
MKYTEGAFRDWGYELATSEFRQETVTERESWILSNKEKNPNISLEDNARQIDPGFDALTP
EKKAQIVKEVETVLNSIWETHGNGKWKEKVLVNDRIADSIFQQIQTRPDEYSILATMNLN
GDYLSDAAAAIVGGLGMGPGANIGDSCAVFEATHGTAPKHAGLDRINPGSVILSGVMMLE
YLGWQEAADLIKKGLSDAIANSQVTYDLARLLEPPVEPLKCSEFADAIIKHFG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaagattaccccccctacaaccggagaaaaaattaccttcaaaaatggtgag
ccggttgtgcctgacaatccaattatcccctttattcggggcgatggaacgggaattgat
atttggccagctacggaaaaagtactggatgcggcggtagccaaagcctatcaaggtaag
cggaaaattagttggtttaagatttacgctggggatgaagcctgtgatttatacgggact
tatcagtatttaccagaggataccttaacagccattagggaatatggtgtggcaattaaa
ggacctttgactactccggtcggtggtggtatccgttccttgaatgtggcactaagacaa
atttttgacttatacgcctgtgtacgtccttgccgttattatgcgggtacaccctcacct
cacaaaaatcctgaaaagctagatgtcattgtttatcgggaaaacacagaagatatttat
ctggggattgagtggaaacaaggtagtgaaataggcgatcgcctcatctctatcctcaac
aaagaactcatccccgccaccccagaacacggtaaaaagcaaatccccctagatgctggg
atagggatcaaacccatcagcaaaactggttcccagcgcctagtacgtcgcgccatcaaa
cacgcccttacattacccaaacacaagcaacaagtgaccttggtgcataagggtaacatc
atgaagtacaccgaaggggctttccgtgattggggttacgaattagccacaagtgagttc
cgccaagagactgtcaccgaaagggaatcttggattttaagcaacaaggagaaaaacccg
aatatatccttggaagacaacgcccgtcaaattgaccctggttttgatgccctgacccca
gagaaaaaagcgcaaattgtcaaggaagtagaaacagttcttaactcaatttgggaaacc
cacggtaacgggaagtggaaagagaaagtgttagtaaatgaccggattgctgacagtatc
tttcaacaaatccaaaccagaccagatgagtattcgattctggcgacaatgaacttaaac
ggcgattacttgtctgatgcggcggctgctattgtcggcggcttaggaatggggccaggg
gcaaatattggcgattcctgcgccgtgtttgaagctacccacggtacagcacccaaacac
gccggcttagacagaattaacccaggttcagtcatcttatctggggtgatgatgttggag
tatttgggttggcaagaagccgcagacctaattaagaaaggtttaagtgatgcgatcgct
aatagccaagtcacctacgatttagctagattactcgaaccaccagttgaacccctaaaa
tgttctgaatttgccgacgcaattatcaaacatttcggttaa
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