Trichormus variabilis: Ava_4842
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Entry
Ava_4842 CDS
T00277
Name
(GenBank) O-antigen polymerase
KO
K16567
exopolysaccharide production protein ExoQ
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
Ava_4842
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Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
ABA24439
UniProt:
Q3M3J7
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Position
6094586..6095887
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AA seq
433 aa
AA seq
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MKKYLLLAEKAFTVLSLLHYSGAPLVVILSGGASEGDDSIAAPDFALIQFIFLIIYFITF
ALLVLRWKKVIQLINKDWYIWLLLLVAIFSIFWSDVPAMTQSRVIALSGTLLFPLYLASR
YTLKEQLHLLAWTFGIAIVGSFLFAFGLRNYGRMAGVHFGTWRGIYNHKNVLGKVMAPSA
MVFLLLALQPEKKRWLFWGGFIASIWLIIASKASSPLINVITLSLSLFLFRILRWRYNFM
IPALVGITTLSTIAYILMTTNAEAIAALLGKDLTLTGRTNFWPLIIDKIAERPWFGYGYG
AFWLGWTGPSADIWYSSGWKPPNSHNGYLDLCLELGLVGLSLYVIDYLQGLLKALAYVRS
VKTSDGFWPGVFLMYVVLSNLTESTLLIQNNFFFVIQISILLSLRICEEQKTTHSMIKHK
KKINYSQKTYKIP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatctactacttgcagaaaaagcttttacagttctgtctctactccattat
tcaggcgctcctctagttgtgattctgtcagggggagcaagtgaaggtgatgattcaata
gcggctcctgattttgccttaattcaattcatatttttaataatttacttcattaccttt
gccttactcgtcctgcgttggaaaaaagtaattcaattaattaataaagattggtatata
tggcttttactcctagtagctatattttccatattttggtctgatgtacctgcaatgaca
caaagtcgcgtcatagctctatcaggaacacttctatttcctctttacttagccagtcgc
tacactttaaaagaacaattacatttactagcatggactttcggcatagcgatcgtaggt
agctttttattcgctttcggcctaagaaattatggtcgtatggctggagtgcattttggt
acatggcgaggaatatataaccataaaaacgttcttggtaaagtcatggctcccagtgcc
atggtgttcttacttctggctcttcaaccagaaaaaaagcgttggctattttggggagga
ttcatagcatcgatctggctaattattgcttcaaaagcatcatcacctcttatcaatgtt
attactttaagtctttcattatttttatttcggattttaaggtggcgatataactttatg
atccccgcgttagtgggaatcacaacattaagtaccattgcatatatattaatgactact
aatgctgaagctatagcagcattattaggcaaagatttaacactcactggacgaactaat
ttttggcctttgatcatcgataaaatagctgaacgtccttggtttggttatggatatggt
gcattctggctgggctggactggtccttccgccgatatttggtactcctctggctggaaa
ccaccaaatagccacaatggttacttagacctttgccttgaattgggattagtaggctta
tcactatatgtaattgattatttacaaggtctactcaaggcattagcttatgtgaggtca
gttaaaacatcagatggattttggccaggagtttttcttatgtatgttgtgttgtcaaat
ctcacagaaagtacattacttatccaaaataatttcttttttgtgattcaaatttctata
ttactatcactacgaatatgtgaagaacaaaaaacaactcattccatgatcaagcataaa
aagaagattaattattcacagaaaacctacaaaataccgtaa
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