Trichormus variabilis: Ava_4846
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Entry
Ava_4846 CDS
T00277
Name
(GenBank) Lipopolysaccharide biosynthesis
KO
K16554
polysaccharide biosynthesis transport protein [EC:
2.7.10.3
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ava01001
]
Ava_4846
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_4846
Enzymes [BR:
ava01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.3 bacterial tyrosine kinase
Ava_4846
Protein kinases [BR:
ava01001
]
Non-receptor tyrosine kinases
Bacterial
Ava_4846
Transporters [BR:
ava02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ava_4846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNVR
AAA_31
ParA
Wzz
CbiA
MipZ
CBP_BcsQ
Suppressor_APC
Fer4_NifH
CLP1_P
AAA_25
KTI12
Motif
Other DBs
NCBI-ProteinID:
ABA24443
UniProt:
Q3M3J3
LinkDB
All DBs
Position
6100353..6102581
Genome browser
AA seq
742 aa
AA seq
DB search
MQSKESIDLDLSRYFAGLKRRWLVAINIFTVTVALSALSTTLLKSSYEAEGKLLFKVPSF
KIIGQNLLASGSEAEGDLKSLVSSQNPINTEIEVLSSPMILDKVIEELNLKNKQGKPLNY
NTLKSGLTLKIIGGTDVLRVAYKSRNPEEGAAIVNKVMDLYLENSILTSRAEAEKTRMLI
AQQLNQPKLNLQRAELALRSFKEQNKIVNLAEESKLAVLQINNLDTQVANVSSELEKVTS
KNNTLRKQISLDVEQAIAINDLSQSQAIQSILTQIQQVEQKLALERSRFLDNDPKIVDLE
TNKKNLQDLLQKQTNQIIGSQVKLPQTKFPLSELKQSMIKEFLQSEQERLSLIKKLNSLS
KSRADYEQRLRIIPQLEQNLGELEQNLESARSTYQTLLTKVQELRLAESKNTASARIIAN
ALVPDKPDSRNKIIVILLGILFGIFLSITTVLFLEIRDRSLKTIQEIREIFEYTLLGIIP
SATTKKITSSHRDVELTNLEVAVRDTPDSLTSEMYRMIQANLRFLSSDQVLKNLVITSAL
PREGKSTVSANLAAAIAQLGRRVLLIDGDMRSPSQHQFWQLNNLVGLSEVLVGQVEFITA
ISKVMDNLDVLTAGVRPPNPLALLDSKRMAALIADFSSQYDFVIIDAPPLLVAADSLTLS
HMTDGILLVSRPNVIDSGSAWAAKDTLERSGQKVLGLLINGVTEKNEFSSDFYVAKKHEF
DETKKWQEVVPVGQTHPNIKDQ
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaaaagaatcgatagatttagatttaagcagatattttgctggactgaagcgt
cgttggttagtggctattaatatctttacggtaacagttgctcttagtgctttatctacc
accttgctgaaatcatcctatgaagcagaaggaaaacttttattcaaagtaccatctttt
aagatcataggtcaaaatttattagctagtggttcagaagctgaaggggatcttaaatca
ctggtatccagtcaaaaccctattaatactgagatagaggttctctcttctccgatgata
ctagacaaggtaatagaagagctaaatctgaaaaacaaacaaggtaaacccttaaattat
aatactctcaaatctggactaactttaaaaattattggtggtacagatgttttaagagtg
gcttataaaagtcgtaatcctgaagagggagcagcgattgtgaacaaggtgatggactta
tatttagagaacagtattcttacaagtagagcagaagctgaaaagaccagaatgctgatt
gctcagcaattaaatcaacccaaattaaatttacaaagagcagaattagccttacgcagt
tttaaagaacaaaataaaattgtcaatcttgcagaagaatctaaattagcagttttacaa
attaacaatttagatactcaggttgctaatgtcagttcagaattagaaaaagttacatct
aaaaataatacactccgcaagcaaatttctctggatgtagagcaagcgatcgctataaat
gatctctctcaatcccaggcaattcaatctattttaactcaaattcaacaagtagaacaa
aaactcgctttagaacgtagtagatttctggataacgatccgaaaatagttgatttggaa
actaacaaaaaaaatctgcaagatttattacaaaaacaaactaaccaaattattggtagt
caagtaaaactaccacagacaaagttcccacttagtgaacttaagcaaagtatgattaaa
gaatttttgcaatcggaacaagaacgattgagtttaattaaaaaattaaattctttgtct
aagtctcgtgcagattatgaacaacgcttacgaattataccccaattagaacaaaattta
ggtgaattagaacaaaatctcgaaagcgctcgctcgacttatcagactctcttaactaaa
gttcaagaattaagactagcagaaagtaaaaatactgcaagtgcgaggattattgctaat
gctttggttcctgataaaccagattccagaaataaaataattgttatattgctaggtatt
ttatttgggatatttttgtcaattactacagttttgtttttagaaataagagatagatcc
ctaaaaacaattcaagaaattagagaaatatttgaatatactttactaggaattattcct
tcagcaactacgaagaaaataacatcttcccatcgggatgtagagttaactaatctggaa
gtagctgtcagagatacgcctgattcattgactagcgaaatgtatcgcatgattcaagct
aatttaagatttctgagttctgatcaagttctcaaaaacttagtaataacaagtgcttta
cctagagaaggtaaatctactgtttcagctaatttagctgctgcgatcgctcaattagga
cgtagagttttattaatcgatggagatatgcgttctccatctcaacatcaattctggcaa
ttgaataatttagtaggtttaagtgaagtacttgttggacaagtagaatttattactgct
atatctaaggtaatggataatttggatgttttgacagcaggtgtcagacctcccaatccg
ttggctttgctagattcaaagcgaatggctgcattaatcgctgatttttcatcacagtat
gattttgtgattattgacgctcctcctctgcttgttgcggctgattccctaactttaagc
cacatgacagatggaattttattagtatctagacctaatgtaattgattcgggtagtgcc
tgggctgctaaagatacattagagcgttctggacaaaaggttttaggtttattgattaat
ggtgtaaccgagaaaaatgaatttagcagtgatttttatgttgctaaaaaacatgagttc
gacgaaactaaaaaatggcaagaggtagtgcctgtggggcaaacacatccaaatattaaa
gatcaataa
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