Trichormus variabilis: Ava_4972
Help
Entry
Ava_4972 CDS
T00277
Name
(GenBank) Transposase, IS891/IS1136/IS1341
KO
K07496
putative transposase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Ava_4972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
RuvC_1
Motif
Other DBs
NCBI-ProteinID:
ABA24569
UniProt:
Q3M367
LinkDB
All DBs
Position
6253409..6254617
Genome browser
AA seq
402 aa
AA seq
DB search
MLKVVKIRLYPHAQQQQSLAQAFGSCRWLWNYCLNLINQAYKETGKGLSGYQVKKIIPQL
KKEHEWLTATYSQCLQQVCLNLGVAFNNFFEKRAKYPRFKSKHGKQSIQYPQNVKVADNY
LSLPKIGDVSATIHRPIEGKVKTVTISKNCSNQYFAAILFDDGKDKPSANTDGKAIGIDL
GLTHFAITSQGSKFDNPRILDKHEKNLKLKQQQLSRKQKGSNNRIKARNKVARVHRKITN
CREDFLHKLSRRIVNENQVIVVENLNVKGMMRNHCLAKSIHQVGWGMFCTMLKYKADMEG
KIYQEVDRFFPSSKTCHVCLNQVGSLPLDVRFWTCENCHTKHDRDVNAAINLRDEGLRIL
TSGTGDKACRPDVSRSNRGRKKSTTTLSAGQEAYTVPQGQCR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggtcgtcaaaatcaggttatatccacatgcccaacagcagcagtcattggct
caagcttttggcagttgtcgttggctttggaattactgtctgaatttgataaaccaagca
tacaaagagacaggcaaggggttgtctggatatcaagttaaaaagataatccctcagtta
aagaaagaacatgaatggctgacagcaacctattcgcaatgtttacagcaggtgtgcttg
aatcttggcgtggctttcaataacttctttgaaaaaagagctaaatatcctagattcaaa
tcaaagcatggtaagcagtcaatacaataccctcaaaatgttaaagttgctgataattat
ttaagtctgcccaaaataggcgacgtatcagcaacaattcatagacccattgagggaaaa
gttaaaactgtaaccatatctaaaaactgttccaatcaatactttgcggctattctgttt
gatgatggcaaagacaaaccttctgcaaatacagacggcaaggcaataggcattgatttg
ggattaactcactttgctattactagtcaggggtctaagtttgacaatcctagaatactt
gacaagcatgagaagaatctaaagctcaaacagcaacagctatctagaaaacagaaaggc
tctaacaaccgtattaaagctagaaacaaagttgctagagttcacagaaaaataactaac
tgccgtgaggattttctacacaagctatcgcgtaggatagttaacgaaaaccaagttatt
gtggttgaaaatctcaatgttaaaggcatgatgcgaaatcattgtttggctaaatccatc
catcaagtaggatggggtatgttttgcacaatgctgaaatataaggcagatatggaaggg
aaaatttatcaggaagtcgatagattcttccctagttcaaaaacctgtcatgtgtgtcta
aatcaagttggcagtttaccgctagatgtaagattctggacttgcgagaactgccataca
aaacatgatcgggatgtgaacgcagctattaacctcagagatgagggactacggattttg
acctctggaacgggggataaagcctgccgcccagatgtaagtcgcagtaatagaggacgt
aagaaatctactactacgctttctgctggacaggaagcctacactgtaccgcaaggtcag
tgtaggtag
DBGET
integrated database retrieval system
