Trichormus variabilis: Ava_5002
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Entry
Ava_5002 CDS
T00277
Name
(GenBank) ABC transporter, substrate-binding protein, aliphatic sulfonates
KO
K15553
sulfonate transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava00920
Sulfur metabolism
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Ava_5002
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_5002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_5002
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
Ava_5002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1
Phosphonate-bd
NMT1_2
OpuAC
NMT1_3
PBP_like
Motif
Other DBs
NCBI-ProteinID:
ABA24599
UniProt:
Q3M337
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All DBs
Position
6287435..6288478
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AA seq
347 aa
AA seq
DB search
MHQPFEPQRRKVLQGLLTYSALGLSGFAAPIIGDILQANAQTKRSGVNTKTVRVGYQTSG
DLVKIKKVLEPRLKSIGVDIEWTPFPAGPQLLEAMNVGRVDIGSVGETPPIFAQAAGAPL
VYIAGRKPSKGEGSAIIVRKNSPIKRVADLKGQKVVFQKGSASHYLLVSALKEAGLKFKD
IQAISLAPAEARDAFLQEKIDAWVTWDPFYAFVQKNAGARTLRNAAGIATQGGFYLSRRE
FAVQNPEVVKVILDEIDKLGRWAESNPKEVVKILAPELKLEPSLLETVVRRRTYGLRRLT
PSLVAEQQRIADLFYAEKIIPKKIDIRQALLTSQQYAAITPQRISGR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaccatttgaaccacaaagacgaaaagttttacaaggattattaacatattca
gccttaggattatctggttttgctgccccgataattggagacatattacaagccaatgct
cagacaaaacggtcaggagttaatactaaaacagttcgagtgggttatcaaacttctgga
gatttagtcaaaatcaaaaaagttttagaaccacgactcaaatctatcggtgtggatata
gaatggacaccatttccggcgggaccccaactgttagaagctatgaatgtaggtagggtt
gatattggttcagtgggagaaacaccaccaatatttgctcaagcagcaggtgcgccactg
gtgtatatcgctggacgcaaacctagcaagggtgaaggtagtgcgatcattgtcagaaaa
aactcacctattaagagagttgcagacctcaaaggtcagaaagtagtttttcaaaaagga
tcagcatcacactatctacttgtcagtgctttaaaagaagcaggtttgaaatttaaggat
attcaagccatcagtttagcacctgcggaagctcgtgatgccttcctgcaagaaaaaata
gatgcgtgggtaacatgggaccccttctatgcttttgtgcagaaaaatgctggcgctcgc
actttaagaaatgcggctggaattgctactcaaggtgggttttatctatcacggcgcgaa
tttgctgtccaaaatcctgaagtggtgaaggtaattttagatgagatagacaaactagga
cgatgggcagaaagtaaccctaaagaagtagtgaaaattctggctcctgaactgaagctg
gaaccgtcacttttagaaactgtggtgcgccgacgcacttatggattaagaagacttact
ccttctctagttgctgaacaacagcgcattgcagatttattttacgcagagaagattata
ccgaagaaaattgatattagacaggcattacttacttctcaacaatatgcagcgatcacg
cctcagcgtattagtggccgatag
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