Trichormus variabilis: Ava_5012
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Entry
Ava_5012 CDS
T00277
Name
(GenBank) ABC transporter, substrate-binding protein, aliphatic sulfonates
KO
K15553
sulfonate transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava00920
Sulfur metabolism
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Ava_5012
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_5012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_5012
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
Ava_5012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1_2
NMT1
Phosphonate-bd
OpuAC
NMT1_3
TPR_Trm732_C
Phage_XkdX
Motif
Other DBs
NCBI-ProteinID:
ABA24609
UniProt:
Q3M327
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All DBs
Position
6300326..6301435
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AA seq
369 aa
AA seq
DB search
MSQLIKDFANISQAWTSKRTTRRHALFAFGCSLVLSTTLFSCSPSQNNNQQQASSSASNV
ANTNATNKVVRIVRSKQLTALAVLEQKRILEERLKPLGYKVEWPEFAAGPQQLEALNTGA
LDIASTAESPPIFSQAAGTPLVYLAANSSDGKAVSLLVPANSNVKSVKDLKGKKIASQKA
SIGHYLIVRAVEREGLKLSDIQPVYLPPPDANVAFSQGKVDAWFIWEPFVTRNVQQKVGR
VLTDGGNGLRDTNNYVSTTRKFYQENPELIKIFLEELQKAQNWAKNNPKELANLLAQTTQ
LDPPTLEIMHSKYDFTLIPITEQIINKQQEVADKWYRLGLIPRKVNVRDGFLTPEQYAEI
TPQEVLAKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaattaataaaagattttgcaaatatatctcaagcgtggacaagtaaacgcact
actcgtcgtcacgccttatttgcctttggctgtagcctagtattgtctaccacactattt
agttgcagtccttcacaaaataataaccagcaacaagcatcttcttccgcatctaatgta
gcaaatacaaatgctactaataaagtggtgaggattgtccgttccaaacaattgacagct
ttagcggttctagaacaaaaacgtattctagaagagcgactaaaacctttaggttacaaa
gtagaatggcctgaatttgctgctggccctcagcaattagaagctttgaatacaggcgca
ctggatattgcttcaactgctgaatcacctcctatcttttcccaagcagcagggacacct
ctagtttatttagctgctaattcttctgatggtaaagcagtgtcgctattagttcctgct
aactctaatgttaaaagtgttaaagacttaaaaggcaagaaaattgcttctcaaaaagca
tctatcggtcactatcttatagtcagagctgtagaaagagaaggtttaaaactgagtgat
atacagccagtttatctaccacctccggacgcaaatgtggcatttagccaaggtaaagtg
gatgcttggtttatttgggaaccatttgtgactagaaatgtacaacagaaggttggcaga
gttttaacagatggtggtaatggtttacgggatactaacaactatgtctctacaacccgt
aagttttatcaagaaaatccagagttaatcaaaatatttctggaagaactgcaaaaagcc
caaaattgggcaaaaaataaccccaaagaactggctaacttacttgctcaaactactcaa
cttgacccgcctacattagaaattatgcacagtaagtatgatttcacactcataccaatt
actgaacaaattattaacaaacagcaggaagttgctgacaaatggtaccgtttagggctg
ataccaagaaaggtgaatgtcagagatggctttttaactccagaacaatatgcggaaatt
actccccaggaagtgctggcaaaaaaatag
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