Trichormus variabilis: Ava_B0071
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Entry
Ava_B0071 CDS
T00277
Name
(GenBank) Transposase, IS891/IS1136/IS1341
KO
K07496
putative transposase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Ava_B0071
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GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
ABA24785
UniProt:
Q3M2K1
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Position
A:complement(85248..86474)
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AA seq
408 aa
AA seq
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MRLVERHIVKTNHQFYKEIDDLAWRSKNLYNYVNYLVRQSFIFDGKYLNNAAIFHLVKHH
ESYTALPRKVSNQVLMVLHRNWKSFFETHKAYKQNPSKFKGCPKLPKYKNKEKGRNIVIY
ELGAISKPLLKQGVIKLSQTEIQFLTKASNIQQVRLIPQCGQYVVEVVYLQDATPQQLNP
DWVAGIDIGLDNLAALTSNKPGFKPVLVNGRPLKAINQQYNKAKARLQSQLKGNAKTSRR
IQALTCKRNNRIDNYLHNASRWIINHLASAGIGTLVIGKNDQWKQEINLGTTTNQNFVSI
PHARFIEQLKYKAELVAMTVLINEESYTSASSFLDLDPIPVYQEGVKHSFSGKRIKRAWY
QCANGRFIHADINASLNITRKVVPAAFSLGIAGIAVCPSRITPGKVAI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagattagtagagcgtcatattgtcaaaacaaatcatcaattttacaaagaaatagat
gatttagcatggcgttctaagaatctgtataactacgtcaactatttagttcggcaatca
ttcatttttgacggtaagtatctcaataatgcagccatattccatctagtaaaacaccat
gaatcatacacggctttgccaagaaaggtaagcaatcaagtattgatggtgttgcaccgg
aattggaaatcattttttgagacacacaaagcttacaagcaaaacccgtcaaagttcaaa
ggttgtccgaaattgcccaagtacaaaaataaagaaaaggggcgaaatatcgtaatttac
gaacttggtgcaatttcaaaaccgttactaaaacaaggagtaatcaaattatctcaaact
gaaatccaatttcttacaaaagccagcaacattcagcaagtgcgcctaattccccagtgc
ggacagtatgtagttgaagtggtgtatttgcaagacgcaacgccacaacaattaaatcct
gattgggtagctggtattgatatcggattagataatttagcggcgttaacttcaaacaag
cccggattcaaaccagttcttgttaacggacgaccactaaaagctatcaaccaacaatac
aacaaagctaaagctcgtctgcaatctcaactcaagggtaacgctaaaacatcacgccgg
attcaagcattaacttgcaagcgtaacaaccggattgataattatctgcacaatgccagc
cgatggattattaatcacttagctagtgcgggtattggtacattggtgattggtaaaaat
gaccaatggaaacaagaaattaatctgggtacaacaactaatcagaacttcgtgagtatt
cctcatgcgcggtttattgagcagttaaaatacaaagctgaattagttgctatgaccgtt
ttgattaacgaagaaagctatacatcggcttcatcattcttggacttagatccaatccca
gtttatcaagaaggcgtgaaacatagttttagtggcaagagaatcaaaagggcttggtac
caatgtgctaatggaagatttatccatgcagatattaacgctagtctgaatataacaaga
aaggtagtccctgcggcttttagcttagggatagcgggtattgcagtttgcccttctcgg
attactccgggtaaagtagcgatttag
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