Trichormus variabilis: Ava_B0100
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Entry
Ava_B0100 CDS
T00277
Name
(GenBank) Transposase, IS891/IS1136/IS1341
KO
K07496
putative transposase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Ava_B0100
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GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
HTH_OrfB_IS605
Cnd1
zf-piccolo
Motif
Other DBs
NCBI-ProteinID:
ABA24812
UniProt:
Q3M2H4
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Position
A:complement(109005..110210)
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AA seq
401 aa
AA seq
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MLDVLKVRIYPNKDQETSLAKSFGCSRFVWNFYLNKTNTQYEETGKGMTYLKMAKDLTQL
KKLTDYEWLQEPTAAVLQQSLKNLESAFKNFFGKRAGFPKFKNKHSKQSIRFPESCSIKE
GGLKLPKLGIVKASLSKSINGKIKSVTVSKISTDKYFAAILFETGDLTNTKEGKISGIDL
GLTSLITVFDGETCYKVDPIKPTRKYAKRLRIRQKALSRKVKGSNNRRKAVKVVAKVHEK
ISNTRQNFLHKLSRKLCDDNQVIVAENLCLKGLARTKLAKSIHDAGFGILLNFVSYKLER
ERGKFIQVDRFFPSTKLCFCCGYKNDLLNLSIREWICPSCQTTHDRDENASRNLRAEGIR
ILSTNTVGHTEFQACGETVRLVGTCAKKRVSEKQESPATLL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttagacgtactgaaggtcagaatttatccaaacaaagaccaggaaacatccttagct
aaaagctttggatgttcccgctttgtttggaatttttacctcaataaaactaatactcaa
tacgaagaaacaggtaagggtatgacttaccttaagatggcgaaagaccttacccaatta
aagaaactaactgattatgaatggctacaagaaccaactgctgctgttctacaacaatca
ctcaagaatctggaatcagcgtttaaaaacttttttggaaaacgcgcaggatttccaaaa
ttcaagaataagcattctaaacagtcaatccgattccctgaaagttgttcaattaaagag
ggtggcttaaaactacccaagcttggcattgttaaagctagtctttcaaaaagcatcaat
ggcaagattaaatctgtaactgtttctaaaataagtacagataaatattttgccgcaata
ttatttgaaaccggagatttaacaaacaccaaggaaggaaaaatatcaggaattgacctt
gggttaaccagtttaataactgtgtttgacggtgaaacttgttacaaggttgacccaatc
aagcctactagaaaatatgctaaacgactgcgaattagacagaaagctttgtctcgtaaa
gttaaggggtctaataataggcgtaaagcagttaaagtagttgctaaagttcacgaaaaa
atatcaaacacaagacaaaattttctccataaactctcacgaaagttatgtgatgataac
caagtcatagtagctgagaacctttgtcttaaaggattggcacgtaccaaattagccaag
tcaatacatgatgctggttttggtatactgcttaatttcgttagctacaaactagagaga
gagaggggtaaatttatccaagttgacagattctttcccagtacaaagctttgtttctgt
tgcggatataagaatgatttgctgaacttaagtatccgcgagtggatttgtccaagttgc
caaacaacccatgacagagatgaaaatgcttcacggaacttgagagcagaagggataaga
atactgtcaacaaatactgtgggacacacagaatttcaagcttgtggagaaacagtaaga
ctcgttggtacttgtgccaaaaagcgtgtttctgagaaacaagaatctcccgctacattg
ctttag
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