Trichormus variabilis: Ava_B0209
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Entry
Ava_B0209 CDS
T00277
Name
(GenBank) two component transcriptional regulator, LuxR family
Organism
ava
Trichormus variabilis
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_40
DUF6115
HTH_29
HTH_38
HTH_23
HTH_68
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABA24921
UniProt:
Q3M265
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All DBs
Position
A:233507..234178
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AA seq
223 aa
AA seq
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MSSIPIKILLVEDDELFRLGLRVRLQQEPGLEIVAEAEDGETAIELLKQIPLDVVLLDVG
LPGIGGIEACKQIKQQNPLLPVLVFTSHSQKPLITRLIEAGAQGYCLKGIAAEKLVLALR
SVASGASWWDATATQEIRSSLSYETPQLEPENRAKLSNPLTGREQEILSLLAAGKTNQEI
AHQLCIAPGTVRVHIHAILQKLEVSDRTQAVLVALQKQLIKSQ
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctatcccaattaaaattctgcttgttgaggacgatgaactcttccgcttgggt
ttacgcgtgcgattgcaacaagaaccagggttagagattgttgctgaggctgaagatggt
gaaacagctattgaactacttaagcaaattcctctggatgtagtgcttttggatgtaggt
ttgccaggaattgggggaatcgaagcttgtaaacaaattaaacagcaaaaccctctatta
ccagttttagttttcacttcccattcgcaaaaacctctaattacacgtttgattgaagca
ggcgcacaaggctactgtctcaaaggaattgctgcggaaaaattagtgttagcattacgt
tctgtggcgagtggtgcttcctggtgggatgcaactgcaacacaagaaattcgttcttca
ttgagttacgagacacctcaacttgagccagaaaatagagcaaagctttccaacccgcta
actgggcgtgaacaagaaattctgtcactattagcggctggaaaaactaatcaagaaatc
gctcaccaactgtgtattgcacctggaacagtgcgagttcatattcatgccattttacag
aaattagaagtgagcgatcgcactcaagctgtgcttgttgctttacaaaaacagttaatc
aaaagtcagtag
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