Trichormus variabilis: Ava_B0217
Help
Entry
Ava_B0217 CDS
T00277
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_B0217
Transporters [BR:
ava02000
]
Other transporters
Pores ion channels [TC:
1
]
Ava_B0217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
AMIN
Motif
Other DBs
NCBI-ProteinID:
ABA24929
UniProt:
Q3M257
LinkDB
All DBs
Position
A:complement(242606..245158)
Genome browser
AA seq
850 aa
AA seq
DB search
MLQLRQFFCVGIAGTIYLIGIGTAKAQNDENISKIPITNISQISDIKRPHTNVKEWLAQQ
QAQIIQVTGVSLNQTSNGLEVILETTASDKLQTSLNSEGNILSVDIPNAQLRLASGDSFL
SQKPVAGITEITVINQDSNTIRVTVIGETSLPKVELDDSENGLIFVVTPITTSAQQPQTP
QTNQADSETPATQPSAQNDEPIELVVTGTRFEIPIQDTPQSIQVIPRQVLEDRGAVRLDE
FTDNVSGVQRITGGDGLGSSGFIIRGFSDVYENLRNGFRSQGGFPRDLANIDRVEVLKGP
AAALYGGGFQSGIVNILTKKPLDEPRYEVKATVGSYDFYRGELDLTGPLVENRSLLYRLN
VAYQNQGSFRDFLNYKSFFVAPSLTWNISQRTSLSFDYEYFNTDYPDDETFRAEPEFLRI
SPKTYLGEPDLANENFTAHSLSLEFSHEFSDNWQYRLGFNTLWQDVFDEGATRSGRLQAD
RRTLNRQFTRRTNDLENLTLRNEILGKFNTGSVRHNLLFGVDYSRLEYAYTFSSAPIAPI
DIFNPIYGARPTAALSLNSNEAYGDDTLGIYLQDIVEVLPSLKILAGVRFDNVNGFYENR
ETNTSINEVSDSKFSPRLGIVYQPGNTTTLYASWSNSFTPQIFGRNSNGEQFKPVTSEQY
EVGIRQEFLDQRLSANLALFQITRQNVATTDPNSSDPFARIQTGEQRSRGVELDINGEIL
PGWKMILTYAYTDAQVTEDNRIPVGDRLPNVPYNSASLWTTYEIQSGNLQGLGAGLGIVY
VGDRQGGLPNTITIPSYVRTDAALFYRRRQFEARLNFKNLFDTNYYDATDGTSINPQEPF
TLIGSFSYRF
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaactaagacagttcttttgtgtgggaattgcaggaactatatatctgatagga
attgggactgcaaaggcacagaacgacgagaatataagtaaaatacctatcacaaacatt
tcccaaatctcggatatcaaacgtccacataccaatgtcaaagaatggctagcgcagcag
caggctcaaattatccaagtgacaggggtaagcctaaaccaaacttctaatggtttagaa
gtcattctagaaactactgcttctgacaaactgcaaacttcactcaacagtgaaggtaat
atcctgagtgttgatatccccaatgctcaattacgtctagctagtggtgattctttcctt
tcccaaaagccagttgcgggaattacagaaataacggtaataaatcaggatagcaatact
attcgagttacagtaatcggtgagacgagtttaccgaaagttgagctagatgacagcgag
aacggtctaatttttgttgtcacaccaattacaacttctgcacagcaaccacaaacacca
cagacaaatcaggctgatagtgaaacaccagcaacccaaccatcagctcaaaatgatgaa
cctatcgaactagttgtaacagggacaagatttgaaattcccatccaagacactccgcaa
tcaattcaggtgattccacgtcaagtgctggaagatagaggagcagtgcgtttggatgag
tttaccgataacgtcagtggtgtccaacggataacaggtggagacggacttgggtcatca
ggctttatcattcgtgggttctctgatgtatatgaaaatctccgcaatggatttcgctct
cagggcggttttccacgcgatctggccaatattgatcgggttgaggtacttaaaggcccg
gcggcggctttgtatggtggtggttttcagtcaggtattgtgaatattttgacgaaaaaa
ccccttgacgaaccacgttatgaagtcaaagctactgttgggagttacgacttttatcgt
ggtgaactcgatttaacaggcccattagtagaaaatcgatcgctgctgtatcgtctgaac
gtcgcttatcaaaatcaggggagttttcgtgacttccttaactacaaaagcttttttgtc
gcgccatctttgacctggaatatcagccaacgtactagtctgagctttgattatgaatat
ttcaacactgattaccccgatgatgaaacatttagagccgagccagaatttttgcgaatc
tcccctaaaacctatttaggtgaaccagatttagccaatgaaaatttcactgctcattca
ctctcactcgaattttcacatgagtttagtgataactggcagtatcgattaggatttaat
acactttggcaagatgtttttgacgagggagcaactcgtagtggtagactgcaagcagat
cgtcgcacattgaatcggcagttcactagacgcactaacgatctggaaaatctgaccctg
agaaacgaaattttaggaaagttcaatactggttctgtgcggcataatctactctttggg
gtggattactcccgcttggagtatgcctataccttctctagtgcgccgatcgctcccatc
gatatctttaatccaatctacggtgctagaccaacagcagcgctttcactgaactctaac
gaggcatacggtgatgatacccttggtatttaccttcaggatattgttgaagtgctgcct
agtttgaaaattctagcaggagtgcgctttgataatgtcaatggcttctacgaaaaccgc
gaaacaaacactagcattaatgaagtaagtgatagtaagttttcaccgagacttggtatt
gtttatcagccaggcaatacgacaacactttatgctagctggtcaaactcattcacaccc
caaatctttggtagaaactccaatggggaacaatttaaacctgtgacttccgagcaatac
gaggtaggaattcgccaagagtttttagaccagcgactgtcagcaaatctggcgctattc
caaattacacgccagaacgtcgctaccacagacccaaactcctctgacccttttgccaga
attcagacgggagagcaacgtagtcgtggggttgaattggatattaatggggaaatttta
cctggctggaaaatgattctgacttatgcttataccgatgcacaggtgacagaggataat
cgcatccctgtaggcgatcgcttaccgaatgtcccttacaatagcgctagtctatggaca
acttatgaaattcaaagtggcaatctgcaaggattgggtgcaggcttggggatcgtgtat
gtaggcgatcgccagggtggactgcctaatacaatcaccataccttcatacgtccgtaca
gatgcagcattattctatcgccgccgtcagtttgaggcacgcctaaacttcaaaaatctc
tttgatactaattattatgatgccactgatggcacatcaattaatccccaagagccattt
acgctcattggtagtttttcctacagattttga
DBGET
integrated database retrieval system
