Trichormus variabilis: Ava_B0224
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Entry
Ava_B0224 CDS
T00277
Name
(GenBank) Periplasmic solute binding protein
KO
K09815
zinc transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_B0224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_B0224
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Zinc transporter
Ava_B0224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZnuA
DarP
Motif
Other DBs
NCBI-ProteinID:
ABA24936
UniProt:
Q3M250
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All DBs
Position
A:complement(251569..252675)
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AA seq
368 aa
AA seq
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MIHSKTSLQPSSNFVRRFSVVVVSAIALSLGSCAANTPSTSSNSQAQSTTAATTDELQVV
TTFLPITQFTKAVAGDRAEVTQLLPTNVGPHDFQARPEDAQKLAKADVLVQNGLEVEEFL
EDLVKNAGNANLKVIDSSQGVKTIANEATEGHDHDHGVNEKAEAGHGHEHGKYNPHVWLD
PKRAIEQVENIRDGLIAADPGGKETYTANTAAYIQQLRDLDAEITKKLQPFAGKTFVAFH
DFAPYFAQSYNLKANFLVDVPEENPSPNDVKRVTDEVKESNLKAILTEPQAGENAFAGLA
KDLNVKVSTFDPIETGGSEALEPNYYITTMRQNVQSLVTAFGGSTQSVLPIWMPQPIAVV
PQRVGFRF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgattcattcaaaaacaagtttacaaccatccagcaatttcgttcgtcggttttccgta
gtggttgtatcggcgatcgcccttagtttaggaagttgtgcggcgaatacaccttcgacc
agctcaaattcgcaggctcaatcgacgaccgcagccacaactgatgagttgcaagtggtg
acaacgtttttaccgatcactcagtttacaaaagccgtggcgggcgatcgcgctgaagtg
acacagctactgccaaccaatgtcggcccccatgattttcaggcaagaccagaggatgcc
caaaaactagctaaagccgatgtgctggtgcagaacgggctggaggtggaggaatttctg
gaggatctggtcaagaatgcgggcaatgctaatctgaaagtgattgattccagtcagggc
gtgaaaacgatcgccaatgaagcgaccgaggggcatgaccatgatcatggcgtaaatgaa
aaagcagaagctggacatggacacgagcatggaaaatacaatcctcatgtctggctcgat
cccaaacgtgccattgaacaagttgaaaacattcgagatggactgattgcggctgaccct
ggtggaaaggaaacctacacggcaaacacagcagcttatattcaacaactgcgagattta
gatgctgaaatcacaaaaaaactgcaaccatttgcgggtaaaacctttgttgccttccat
gactttgccccctactttgctcaaagctataacttgaaagccaattttctggtagatgtg
ccggaagaaaatccatcgccgaatgatgtcaaacgggtgacggatgaagtgaaggaatct
aatctcaaagcgattctgacggaaccccaggctggagaaaatgcgtttgcagggttggca
aaggatctaaatgttaaggtcagcacttttgatccgattgaaactggtggttccgaagca
ctggaaccgaattattacatcacaaccatgcgtcagaacgtgcagagtttggtcactgct
tttggtggttcaacccagtctgtgttgccgatctggatgcctcagcctattgcagtagtg
ccacagcgagttgggtttaggttttag
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