Trichormus variabilis: Ava_B0330
Help
Entry
Ava_B0330 CDS
T00277
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ava
Trichormus variabilis
Pathway
ava00270
Cysteine and methionine metabolism
ava01100
Metabolic pathways
Module
ava_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Ava_B0330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ava03000
]
Ava_B0330
03032 DNA replication proteins [BR:
ava03032
]
Ava_B0330
03036 Chromosome and associated proteins [BR:
ava03036
]
Ava_B0330
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ava02048
]
Ava_B0330
Enzymes [BR:
ava01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Ava_B0330
Transcription factors [BR:
ava03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Ava_B0330
DNA replication proteins [BR:
ava03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Ava_B0330
Chromosome and associated proteins [BR:
ava03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Ava_B0330
Prokaryotic defense system [BR:
ava02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Ava_B0330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ABA25040
UniProt:
Q3M1U6
LinkDB
All DBs
Position
A:354562..355323
Genome browser
AA seq
253 aa
AA seq
DB search
MKSVLSLFSGIGGLCHHGIAAAGLSHKFQVRQFVEISPYSQSVLRYEQPQTPIHSDITTY
HCNRGQFDILCGGFPCAGTSNSGNRQGLSDPRSALWAEQFRIIESDRPAIALIENPTGLL
YRGLEQIIYDFDSIGYMGEWNCISAQQVGLSHQRKRIFIIAYPDGLFNRQQQAPWTNQIG
NHITQVRLSLETRSYQPGVLAVAHGIPIGVAKNISGNYDARRAYGLSCSPRQSAVAWKRI
DYLCSLLSYQEAF
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagtcctctccttattctccggcatcggcggactgtgccatcacggtatcgct
gcggcgggtctatctcacaagtttcaagtaaggcaatttgtcgaaatatccccctattca
caatcggtactgcgttatgaacagccccaaaccccaatccactcggacattaccacctac
cactgcaacaggggacagtttgacatcttgtgtgggggattcccttgcgccggcacaagt
aactctggcaaccgacaaggactctctgaccccagatccgcgctctgggctgaacagttc
cgcatcattgaatccgatagaccagcgatcgctcttatcgaaaaccccacaggtttgctc
tatcgcggacttgagcaaatcatctatgactttgacagcatcgggtacatgggcgaatgg
aactgtatctctgcacaacaagtcggcttgtcgcaccaaaggaaacgaatctttatcatt
gcctaccccgatggcctattcaaccgtcaacagcaggccccctggacaaaccaaattgga
aatcacattacgcaagtacggctctctctcgaaacaagaagctatcaacccggagttctt
gcggtggctcatgggattcccattggagtagctaaaaacatctctggtaactatgatgcc
cgtcgtgcttacgggttgagttgctctccgcgacagtccgccgttgcttggaaacgcatt
gattatctatgcagtttactttcttatcaggaggcattttga
DBGET
integrated database retrieval system
