Trichormus variabilis: Ava_C0022
Help
Entry
Ava_C0022 CDS
T00277
Name
(GenBank) Transposase, IS891/IS1136/IS1341
KO
K07496
putative transposase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Ava_C0022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
Zn_Ribbon_TF
Zn_ribbon_8
DZR
DivIC
C1_1
Zn_ribbon_FGT1_1
Ima1_N
DMPK_coil
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ABA25111
UniProt:
Q3M1N9
LinkDB
All DBs
Position
C:complement(38644..39768)
Genome browser
AA seq
374 aa
AA seq
DB search
MKTLKFKLYQHKRNRHLKRIINAAGVIYNHCIALHKRYYRMWGNHLSCAKLQSHIAKLRK
RNLFWQSLGSQAVQDICQRIEKAYQLFFKHNKKGVRPPGFKKVKKYKSFTLKQAGYKFLG
SNRVKIGHRVYQFWKSRDIEGTVKTLTIKRTPLGELFMVVVVDNVSQAEIEVKTGKIAGF
DFGLKTFLTCSDGTKIESPQFFKQSLNAIKKASRQHSKKLKSSSNRERARKNLVRKYEDI
SHRRRDWFWKLAHELTDKFDILCFETLNLKGMQRLWGRKISDLAFGEFLQILKWIAKKKN
KLVVFIDQWYPSTKTCSGCGHVLEELDLSIREWRCPSCQSVNGRDENASKVICAVGASTV
GLGDVSRYETAIAV
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagacactgaagtttaagctatatcaacacaaaagaaatagacaccttaagcgcatt
attaatgcggctggggtaatctacaatcattgcattgctctacacaaacgctactacaga
atgtggggcaatcacttgagttgtgcaaaacttcagtctcatattgccaaattaagaaaa
cgtaatttattctggcaatcgctaggttctcaagcagtacaagatatctgtcaacgcata
gagaaagcctatcaactattttttaaacacaataaaaaaggagttagaccaccaggattt
aaaaaggttaaaaaatacaaatcattcactctcaaacaagctggttataagtttttaggt
agcaacagggtgaaaattgggcatcgagtatatcaattttggaagtctagagacattgag
ggaacagttaaaaccttaaccattaaacgcacaccattaggtgaattgtttatggttgta
gtggttgataatgttagtcaagcagaaattgaagttaagacgggtaaaatcgctggcttt
gattttgggttgaaaacattcctcacttgctcagacggtactaaaattgaatcaccccaa
tttttcaagcagtcactcaacgccatcaaaaaagccagcagacagcattccaaaaaacta
aagagttcatccaacagggagcgagctaggaaaaatttggtacgcaaatatgaagatatt
tctcatcgtcggcgtgattggttttggaaattggcccatgaactaacagataagtttgat
atactgtgttttgagacgctgaacctcaagggaatgcaacgactttggggaagaaaaata
tcagatttggcgtttggcgagttcctacaaattttaaaatggattgctaaaaagaagaat
aaactggttgttttcatcgaccagtggtatccatccactaagacttgctctggctgtgga
cacgttctagaagagttggatttatctattagagaatggcgttgcccatcttgccaatca
gtaaatggaagggatgaaaacgcatctaaagtaatttgtgcagtcggggcatcgactgtt
gggttaggggatgtaagtcggtatgaaactgctatcgctgtttga
DBGET
integrated database retrieval system
