Trichormus variabilis: Ava_C0027
Help
Entry
Ava_C0027 CDS
T00277
Name
(GenBank) Transcriptional Regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ava03000
]
Ava_C0027
Transcription factors [BR:
ava03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Ava_C0027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_5
DUF3736
KA1_BRSK
SAM_DprA
Motif
Other DBs
NCBI-ProteinID:
ABA25116
UniProt:
Q3M1N4
LinkDB
All DBs
Position
C:complement(45083..45982)
Genome browser
AA seq
299 aa
AA seq
DB search
MLASDLLVIDFAQKDDVLKLYPEAPLLSSDKAQWDGIQLQYHRHPPHQLSENHSKQHRII
IHDRSPSPPMVEEMIEHRFQKRQFGYGDVTVVPADVLNSAYWNTEYEFITLSFEARTFAR
HTFDLTTATDIELVPSFSKPDQLIYSLGFALKSELESSGVGSRLYIDSLTAALMTHLLRH
YSAQRSISRPQSGLAKCQLQKVIDFINQNLEQDLALAELAAIVQMSPSYFSTLFKHSTGL
APHQYVIQCRVDRAKQLLRQSNLTIAEIAYSLGFTHQSHLSRHFKRLVGVSPKVFIKSQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttagcctcagacttgttagttattgactttgctcaaaaggatgacgtgctaaagctt
taccctgaagcgcccctactttccagcgacaaagctcaatgggatggtattcaactgcaa
tatcatcggcatccgccacatcagctttcagaaaatcattccaagcagcatcgcattatc
attcacgatcgcagtccttcgccgccaatggttgaagagatgatcgaacatcgctttcaa
aagcggcaatttgggtatggcgatgtgacggttgtgccagctgatgtcctaaattcggct
tattggaacaccgagtacgaatttattaccctcagttttgaggcgaggacgtttgcacgt
cataccttcgatctgacaactgccactgatatcgagcttgtccccagtttcagcaaacct
gaccagctgatttacagtcttggcttcgcgctcaagtcagagctggagtctagcggagtt
ggcagtcgtctctatattgattcgctaacagctgctttgatgactcatttgttacggcat
tactcagcccaaagatccatctctagacctcagagtggtttagccaaatgccaattgcag
aaggtgattgatttcattaatcaaaaccttgaacaggacttggcacttgcggaactagca
gccattgtgcaaatgagtccgagttatttttcaacgttattcaaacattcaaccgggtta
gcaccgcatcagtatgtgattcagtgcagagtagatcgtgccaagcaattgctacgacaa
agtaacctaacgatcgcagaaattgcctacagtcttggcttcacccatcaaagccacctc
agccgacacttcaaacgattggtgggtgtaagtcccaaagtatttattaaaagtcagtaa
DBGET
integrated database retrieval system
