KEGG   Trichormus variabilis: Ava_C0090
Entry
Ava_C0090         CDS       T00277                                 
Name
(GenBank) Histone-like DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ava  Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:ava00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ava03032]
    Ava_C0090
   03036 Chromosome and associated proteins [BR:ava03036]
    Ava_C0090
   03400 DNA repair and recombination proteins [BR:ava03400]
    Ava_C0090
DNA replication proteins [BR:ava03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Ava_C0090
Chromosome and associated proteins [BR:ava03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    Ava_C0090
DNA repair and recombination proteins [BR:ava03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      Ava_C0090
SSDB
Motif
Pfam: Bac_DNA_binding
Other DBs
NCBI-ProteinID: ABA25179
UniProt: Q3M1G4
LinkDB
Position
C:complement(115841..116083)
AA seq 80 aa
MNRKILSIKITTTVTEAVANGDKVTLVGFGSFERRDHEVCRRYRSEREGRNPQTNEKITI
PATKIPAFSAGKQFREKVAP
NT seq 243 nt   +upstreamnt  +downstreamnt
atgaaccgaaagattctttcaatcaaaatcacaactactgttactgaagctgtagcgaat
ggagataaggtaacacttgttggttttggctcattcgagcgacgcgatcacgaagtgtgc
cgaaggtatcgctcagagcgtgaagggcgtaatccccaaaccaacgagaaaatcaccatt
cctgctaccaaaatacctgcattttctgctggcaagcagtttcgggagaaagtagcacca
tag

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