Trichormus variabilis: Ava_C0141
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Entry
Ava_C0141 CDS
T00277
Name
(GenBank) Heat shock protein Hsp70
KO
K04043
molecular chaperone DnaK
Organism
ava
Trichormus variabilis
Pathway
ava03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ava_C0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ava03019
]
Ava_C0141
03110 Chaperones and folding catalysts [BR:
ava03110
]
Ava_C0141
03029 Mitochondrial biogenesis [BR:
ava03029
]
Ava_C0141
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ava04147
]
Ava_C0141
Messenger RNA biogenesis [BR:
ava03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Ava_C0141
Chaperones and folding catalysts [BR:
ava03110
]
Heat shock proteins
HSP70 / DNAK
Ava_C0141
Mitochondrial biogenesis [BR:
ava03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
Ava_C0141
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Ava_C0141
Exosome [BR:
ava04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ava_C0141
Exosomal proteins of breast cancer cells
Ava_C0141
Exosomal proteins of colorectal cancer cells
Ava_C0141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
ParM_N
Hydantoinase_A
RD3
Motif
Other DBs
NCBI-ProteinID:
ABA25229
UniProt:
Q3M1B4
LinkDB
All DBs
Position
C:complement(169582..171471)
Genome browser
AA seq
629 aa
AA seq
DB search
MAKIVGIDLGTTNSCIAVIEGGQPVVIPNTEGGRTTPSVVAYTKKGEKLVGQIAKRQGVM
NPENTFYSVKRFIGRRYDEVTQEAKQVTYKVVRDSNGNVKLHCPALNKEFSPEEIAAEVV
RKLIDDASTYLGEPVRQAVITTPAYFNDSQRQATKDAGRIAGIEVLRIINEPTAAALAYG
LDKKTNETILVFDLGGGTFDVSILEVGDGVFEVKATSGDTHLGGDDFDKRIVDWLATEFQ
RNEGIDLRKDKQALQRLTEAAEKAKIELSGATQTNINLPFITATPEGPKHLDMTLTRVQF
EQMCADLFDRSRIPVEQALRDAKLSPADIDEVILVGGATRMPAVQQLVRQIIGKDPHQGV
NPDEVVAVGAAIQAGVLGGEVKDVLLLDVTPLSLGVETLGGVTTKIIPRNTTVPVKKSEV
FSTAADAQTNVEIHVLQGEREMASDNKSLGTFRLDGIPPAPRGMPQIEVTFDIDANGILS
ATAREKATGKEQSISITGASTLDKSEVERMVKEADRNAEEDRRRREQIDTKNMADSVAYQ
AEKQLQDLGDKVPPADKSRVEGLIRDLRQAIEQNNIDRMKSLTNEIQQALMQIGTAVYSQ
AGASPNGGTSTDRQGGGEDVIDADFVEQK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatcgttggtattgatttaggaactaccaactcctgtatagctgtaatagag
ggcggacaacccgtcgtcattccgaacacagaaggcggtcgcacaactccgtctgtggtt
gcctacaccaagaagggcgaaaaacttgtcgggcaaattgccaagcgccagggtgtaatg
aacccagaaaacactttttattctgtgaagcggttcatcgggcgcaggtatgatgaagtc
acccaagaggcaaaacaagttacttacaaagtggtacgtgacagtaatggcaacgtcaag
ctacactgtcccgctctgaacaaggaattttcacccgaagaaatcgcggctgaggtagtc
cgcaagctgatagatgatgccagcacatatctgggggaaccagtgaggcaagcggtaatt
accacccctgcctatttcaatgactctcaacggcaggccaccaaagatgccggtagaatt
gccgggattgaagttctgcgaattatcaacgagccaacggcggctgccctcgcttacgga
cttgacaaaaaaactaacgaaactatcttggtatttgacttaggcggtgggacgtttgat
gtgtctatcctagaagtgggtgatggtgtgtttgaagtgaaagctaccagtggcgacacc
cacttgggcggtgatgactttgataagagaatcgtagactggctagcaactgaattccag
cgtaacgaaggcatcgacctccgtaaagacaaacaagccctgcaacgcctcaccgaagca
gcagaaaaagccaaaattgaactgtcaggcgcgacacagacgaacattaacttacctttt
attactgcaaccccggaaggcccgaaacatctagatatgaccttaacgcgggtacagttc
gagcaaatgtgcgccgacttgttcgatcgcagccgcattcctgtcgaacaagctctgcgc
gatgctaaactgagtcccgcagatattgacgaagtaatcctagtgggtggtgcaactcga
atgccggctgtccagcaactggtacggcagataataggcaaagacccacaccaaggtgtc
aacccggatgaagtcgtagcagtgggcgcagcgattcaggcgggtgtgcttgggggtgag
gtaaaagacgtgctgctcctagatgtcacgccgttgtcgctaggtgttgaaactctaggt
ggcgtgacgaccaagattattccgcgcaataccactgtcccagtgaagaagtctgaggtg
ttctcaacggcggctgacgcacaaacaaacgtagaaatccatgttctgcaaggcgaacgc
gaaatggcatccgacaacaagagcctgggaaccttccgactagatgggattcctccagct
cccagaggtatgccacagatcgaagttacttttgacattgatgctaacgggattctgtca
gcaactgccagagaaaaagccacaggtaaagaacagtccattagcatcacaggtgcgtct
accctcgataaatctgaagttgagcggatggtgaaagaagccgatcgcaatgcggaagaa
gaccgtaggcggcgcgaacaaattgataccaaaaatatggcggattctgttgcctatcaa
gccgagaaacaacttcaggatttgggcgacaaagtgccaccagcagacaagtcccgcgtg
gaaggcttaattcgagacttgcgtcaggcaattgagcagaacaacatcgatcgcatgaag
tccctcaccaacgaaattcaacaagccctgatgcaaatcggcactgcggtctactcacaa
gcaggtgcatctccaaacggtggtacttctacagaccgtcaaggcggcggtgaagatgtc
atcgatgcagactttgtggaacaaaagtaa
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