Acinetobacter variabilis: RYU24_02260
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Entry
RYU24_02260 CDS
T07586
Symbol
fadD_1
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
avb
Acinetobacter variabilis
Pathway
avb00061
Fatty acid biosynthesis
avb00071
Fatty acid degradation
avb01100
Metabolic pathways
avb01212
Fatty acid metabolism
avb02024
Quorum sensing
Module
avb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RYU24_02260 (fadD_1)
00071 Fatty acid degradation
RYU24_02260 (fadD_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RYU24_02260 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
avb01004
]
RYU24_02260 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avb04147
]
RYU24_02260 (fadD_1)
Enzymes [BR:
avb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RYU24_02260 (fadD_1)
Lipid biosynthesis proteins [BR:
avb01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RYU24_02260 (fadD_1)
Exosome [BR:
avb04147
]
Exosomal proteins
Exosomal proteins of breast milk
RYU24_02260 (fadD_1)
Exosomal proteins of breast cancer cells
RYU24_02260 (fadD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BCT87821
LinkDB
All DBs
Position
258556..260232
Genome browser
AA seq
558 aa
AA seq
DB search
MEKIWFAEYQKTGIPETVELPAENTSLVDIFERNFQKFGSRDAFIFMDKTLTFNELEEAS
RKFAAYLQSLGLAKGTRVAVMMPNVLQYPVVALGVFRAGLVLVNVNPLYTSRELEHQLKD
SGAEVLVIIENFASVYQSIIGKTPVKHVVVASVGDMLGALKGTLVNFVLRSVRKQIPAWD
IPGHIKFNAALNKVNPSNYKRPELTLSDTAVLQYTGGTTGVSKGAELTHRNLVANLLQCD
GIFQSKFGAQDGQPDDRIFCALPLYHIFAFMVCALYGMYKGQANVLIPNPRDLPAVMKEL
RKYQPTFFPAVNTLFNALVNNEEFKQLDHSRLKMAMGGGMAVLPSTAEAWKKITGTNIIE
GYGLSETSPVATANPPASEEFSGTIGIPLPSTEVGILDDDGNEVALGEQGEISIRGPQVM
KGYWNRPDETDKVMVNGFFRTGDIGVMDSRGYIKIVDRKKDMILVSGFNVYPSEIEEVVA
KHPKVLEVAAIGVPDEKSGEVPKLFVVKKDPSLTTEEVLAFAKENLTGYKRPRYVEFMDE
LPKSNVGKILRKDLRKSA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttggttcgctgaataccaaaaaacagggattccagaaactgtagaatta
ccagcagaaaatacatctctggttgatatttttgaacgcaatttccaaaaatttggctca
cgtgatgcctttatctttatggataagactttaacgttcaatgagttggaagaagctagt
cgtaaattcgcagcatatttacaaagtttgggtctggcaaaaggcacacgtgttgccgta
atgatgccaaacgttcttcaatatccggtcgtagcattgggggtgttccgcgctggttta
gtactggtgaatgtaaatccactgtatacatcacgtgagcttgagcatcagttaaaagat
tctggcgctgaagttctggtcattattgagaattttgcaagcgtttatcagtcaattatt
ggcaaaacacctgtgaagcacgtcgtggttgcttctgtgggtgacatgctgggtgcttta
aaaggtactttggtgaactttgtattacgttcagtacgtaagcagattccggcatgggat
attccaggtcacatcaagttcaatgcagccctgaataaagttaacccaagcaactataaa
cgccctgaattgactttaagtgatactgctgtacttcagtacacaggtggtactacaggt
gtttctaaaggtgctgaactgacccatcgtaacctggttgctaacctgttgcagtgtgac
ggtatcttccagagcaaattcggtgcgcaagatggccagccagatgaccgtattttctgt
gctttaccgctttatcacatctttgctttcatggtctgtgcactttacggcatgtataaa
ggtcaggcgaacgttctgattcctaacccgcgtgatctgcctgcggtgatgaaagaatta
cgtaaataccagccaacattcttccctgctgtgaacacgctgtttaatgcgcttgtaaac
aacgaagagttcaagcaactggatcatagccgtttaaaaatggcgatgggcggtggtatg
gctgttctgccttctactgcagaagcttggaagaaaattactggcactaacatcattgaa
ggttatggcctgtctgaaacttctccagtggcaactgcaaacccaccagcatctgaagaa
ttcagcggtacgattggtattccgttgccttcaactgaagttggtattcttgatgatgac
ggtaatgaagttgcactcggtgagcagggtgaaatctcaatccgtggtcctcaagtgatg
aaaggctattggaaccgtccggatgaaaccgataaagtgatggtaaatggcttcttccgt
accggtgatattggtgttatggattcacgtggttacatcaaaatcgttgaccgtaagaaa
gacatgattctggtctctggcttcaacgtttatccttctgaaattgaagaagtcgttgcg
aaacatccaaaggtactggaagtggctgcaattggtgtaccagatgaaaaatcaggtgaa
gtgccaaaattgtttgttgtgaagaaagatccttcattgacgactgaagaagttctggca
tttgcgaaagaaaacctgaccggttataaacgcccacgttatgtggaatttatggacgag
ttaccgaaatctaacgtaggcaaaatcctgcgtaaagacctacgtaagtctgcataa
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