Acinetobacter variabilis: RYU24_04750
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Entry
RYU24_04750 CDS
T07586
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
avb
Acinetobacter variabilis
Pathway
avb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RYU24_04750 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avb03021
]
RYU24_04750 (rpoA)
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_04750 (rpoA)
Enzymes [BR:
avb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RYU24_04750 (rpoA)
Transcription machinery [BR:
avb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RYU24_04750 (rpoA)
DNA repair and recombination proteins [BR:
avb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RYU24_04750 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BCT88070
LinkDB
All DBs
Position
507406..508413
Genome browser
AA seq
335 aa
AA seq
DB search
MTRTANEFLTPQAIKVEAASGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDVTAADLRLPHN
VEVVNPEHLIGTLSASGNLKMRLKVAQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR
VSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQAPVA
QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtactgcaaatgagtttctaactccgcaagcgatcaaggtcgaagcggcaagc
gggacctcggcaaaagttattctagaacccttagagcgtggctttggtcatactctgggc
aatgctttacgtcgcatccttctttcttctttacctggcgctgctgtggtagaagttgag
attgaaggtgttgagcacgagtacagtactttggaaggcttgcagcaggacatcgtcgag
ctcttgctgaacctaaaaggattgtctattaagctgttcgatcaaaatgaagcttattta
acattagagaaacaaggtccaggcgacgtaactgcggctgaccttcgtttacctcataat
gttgaagtggttaaccctgaacacttgatcggcacgctaagtgcatcaggcaatctgaag
atgcgcctgaaagtggctcaaggccgtggctatgagacttctgactcacgttttccagaa
ggcgagactcgcccagtgggtcgtttacagttagatgcatcttacagcccgatcaaacgt
gtgtcttacacagtggaaaacgctcgtgtagaacaacgtactgaccttgataaactggtc
attgatcttgaaaccaacggtacagttgatcctgaagaagcaatccgcaaagcggcaaca
atcttgcaacaacaaattgcaatctttgttgatcttcagaaagatcaagctcctgtggct
caagaacctcgtgaagaagttgatccaattttgcttcgtccagtagatgatctagagcta
actgttcgttctgctaactgtttgaaagcagaaaacatttactacattggtgatcttgta
cagcgtactgaggttgagttacttaaaactcctaaccttggtaaaaaatcgcttactgag
atcaaagatgttctggcttccaaaggcttacaactcggcatgcgtttagagaactggcca
ccagctagtctccgtatggacgatcgtttcgcctatcgtagccgttaa
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