Acinetobacter variabilis: RYU24_05060
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Entry
RYU24_05060 CDS
T07586
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
avb
Acinetobacter variabilis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avb03016
]
RYU24_05060 (miaB)
Enzymes [BR:
avb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RYU24_05060 (miaB)
Transfer RNA biogenesis [BR:
avb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RYU24_05060 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Amdase
Motif
Other DBs
NCBI-ProteinID:
BCT88101
LinkDB
All DBs
Position
complement(538555..540012)
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AA seq
485 aa
AA seq
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MTVQTFIPNGAPAASENTVTQPAHTPAIDDSVKKLYIETQGCQMNEYDSHRMADLLGDSH
GYVLTTDPKEADILLMNTCSIREKAQEKVFSELGRWRKLKEKNPDLIIGVGGCVASQEGD
NIQKRANYVDMIFGPQTLHRLPQMLDQHFEQVEKPKKEKIKLVDISFPDIEKFDFLPEPR
VEGYKAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQNV
NGYRGETFDGKICTFADLLRLVAEIPGIGRIRYTTSHPLEFNDDLIQCYRDLPQMVSHLH
LPVQSGSNDVLQAMKRNHTIDVYIEKIEKLRKVRPDMHLSSDFIIGFPGETDENFEETYQ
FIQNLDFDHSYSFVYSKRPGTPAAELEDTTPEQVKKERLAKVQGWIKQSSIRKTDAMLGT
VQRVLVEKVSDKDPNILVGTADNTRYVTFIGDASWVGRFAEIEITEIKTLNLVYGELLNL
EPDVA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacggttcaaaccttcattccgaatggtgccccagctgcctcagaaaacactgtcacc
cagccagcgcacaccccagccatcgatgattcagttaaaaaactgtatatcgaaacgcaa
gggtgtcagatgaatgagtatgacagtcatcgtatggcagatctgctgggcgattcccat
ggctatgtgctgaccactgatcctaaagaagcggatattctgctgatgaatacctgctcg
atccgtgaaaaggcacaagaaaaagtattctcagaattgggccgctggcgtaagctgaaa
gaaaaaaatccggatctgattattggtgtcggtggatgtgtggcttctcaggaaggtgac
aatatccagaaacgtgccaattatgtagacatgatttttggtccgcaaactctgcaccgt
ttaccgcaaatgctggaccagcattttgagcaggtcgaaaaaccgaaaaaagaaaaaatc
aagctggtggatatttcgttcccggacatcgaaaaatttgacttcctgcctgaaccacgt
gttgaaggttataaagcctttgtttcgatcatggaaggctgttcaaaatactgttctttc
tgtgtagttccatatacacgtggcgaagaagtgtctcgtccactggatgacgttctggca
gaaattgctggcttggcagaaaaaggcgtgcgtgagatttcgctgctcggtcaaaacgta
aatggctatcgcggtgaaaccttcgacggtaaaatctgtacttttgccgatctgttacgc
ttggttgcagaaattccgggtattggtcgtattcgttataccacttcgcatccactggaa
ttcaacgatgatctgatccagtgctatcgtgacttgccacaaatggtgtcacatctgcat
ttaccagtacaaagcggttccaatgatgtcttacaggcgatgaaacgtaaccacaccatt
gatgtgtatatcgagaaaatcgagaaactacgtaaagttcgcccagacatgcatttatct
tcagactttattatcggcttcccgggcgaaaccgatgagaacttcgaagaaacctatcag
tttattcaaaatctggatttcgaccattcttatagttttgtttattccaaacgtccgggc
acccctgccgcagagctggaagatacgacacctgaacaggtgaaaaaagaacgtttggcc
aaagttcagggctggattaaacagtccagtattcgtaaaacagatgccatgctcggtaca
gttcaacgtgtactggttgagaaagtttctgataaagatccgaacattctggtcggtaca
gcagacaacacccgttatgtcacctttattggagatgcatcatgggtaggacgctttgca
gagatcgaaatcaccgaaattaaaactttaaatttagtttacggtgagctcttgaatctt
gagcctgacgtggcgtaa
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