Acinetobacter variabilis: RYU24_05070
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Entry
RYU24_05070 CDS
T07586
Symbol
slt_1
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
avb
Acinetobacter variabilis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avb01011
]
RYU24_05070 (slt_1)
Enzymes [BR:
avb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RYU24_05070 (slt_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
avb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RYU24_05070 (slt_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
QueG_DUF1730
Motif
Other DBs
NCBI-ProteinID:
BCT88102
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Position
540326..542281
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AA seq
651 aa
AA seq
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MFKHTKNMKKYYKLLNLSVACLCSMSAQAAEEQFNDALRAANTGNIGQLQQYQSVMQNDA
LGYYPEYWILNQNLGSQPASQIISFAQRYPQSAMAEKLAADYVEEKVKMADFSTAQPVLQ
YVTNADPAEACAVAQVRAKSGDQLVYAEFKDVWLTTNSQPESCTGLGRMMLSSPLMTNED
RQQRLWVQLRAGQSGQAIATAQGLGLNLSLAQLNTIQANPTNYLWSAPKSTAADHAYLIY
ALGRLADSDLDSAMSIVKRTAEGTPVQVQKTLFRTVGYIGGTTVMKNNFNREVLNYLDAS
YGLPFSPEEAEIYARQAIRFSAWESLIRAIDAMSVNQKQEDRWQYWLARASEQRTDRASK
QAAESIYKKLAVGEDYHNLLARDRLGQLTASTPNSAQPSSQAMQRLNQDIHFRRAFALRN
INAPENYINREWNWAVRQAYLRKDDDLLLAAAKRAMDMGWYDRAIYAADRTADKHNYNYR
YPMPYQNYVVSHSRNAGIDAAWAYGLMRQESRFNTGARSHVGAGGLMQIMPDTAKLVARQ
MGETYNPAALTDMNTNIRYGTYYLSTIQRQLSNSPVLATAGYNAGPNRARRWQPEFQSIA
ADQYTETIPLLETRDYVKHVMTNATYYGILLGQGAQSVGKRMQAIPLRNTP
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacacaccaaaaatatgaagaaatattataaattactaaacttgagtgtggcg
tgtctgtgttcaatgagtgcgcaggcagcagaagaacaatttaatgatgctttaagagcg
gcaaatactggaaatatcggacaattacaacaatatcagtctgtcatgcaaaatgatgcc
ttgggctattatcctgaatactggattctgaaccagaaccttggctcccaacctgccagt
caaattatcagtttcgcccaacgctatcctcaatcggctatggcagaaaaacttgcagcc
gattatgtcgaagaaaaagtcaaaatggctgacttttctactgcacaaccagttctgcaa
tatgtcaccaatgccgatccggctgaagcctgtgcagttgcacaagtccgtgccaaaagt
ggcgatcagctggtttatgctgagtttaaggatgtttggctaaccaccaattctcaacct
gagtcttgtacgggcttaggacgcatgatgttatccagtccgcttatgaccaatgaagac
cgccagcagcgtttgtgggtgcaattacgtgctggtcagtctggacaggcgattgccact
gcacaaggtttagggcttaacctgtctctggctcagctcaatacgattcaggccaatcca
accaattacttatggtctgctcctaaaagtactgctgctgatcatgcctatctgatttat
gcgttggggcgtctggcagatagcgatcttgattcagcaatgtccatagtgaaacgcact
gctgaaggcacgccggtacaagtgcagaaaacactattcagaactgttggttatattggc
ggcactacggtaatgaagaataacttcaaccgtgaagtgctgaactatctggatgccagc
tatggtctgccatttagcccggaggaagccgaaatttatgcccgtcaggcgattcgtttt
agtgcctgggaaagtctgattcgtgccattgatgccatgagtgtgaaccagaaacaggaa
gaccgctggcaatactggctggcacgtgccagtgaacagcgtacagatcgcgcgtcaaaa
caggcagcagaaagtatctataaaaaactggcggtcggtgaggattatcataacctgcta
gcgcgagatagattaggccaattaacggcttctacaccgaattcagcgcagccatccagt
caggctatgcaacgcttgaaccaggatatccatttccgccgtgcctttgccttacgtaat
attaatgcaccagagaattatattaaccgtgaatggaactgggcagtgcgtcaggcttat
ttaagaaaagatgacgatttactgttggcagcagccaaacgcgcgatggatatggggtgg
tatgaccgtgccatttatgcagcggatcgtactgcggacaagcataattacaattatcgt
tatccgatgccatatcagaattatgtggtgagccatagccgtaatgccggcattgatgct
gcctgggcttatggtttgatgcgtcaggaaagccggtttaataccggcgcacgctctcat
gtaggcgctggtggtttgatgcagatcatgccggacaccgccaaactggtcgctcgtcaa
atgggtgaaacctataacccggcagccttaactgatatgaacaccaatatccgttacgga
acttactatttatcaacaattcagcgtcaattgagcaatagtccagtactggcaacagca
ggttataatgccggcccgaaccgtgcccgccgttggcaacccgaattccaaagtattgct
gcggatcaatataccgaaaccattcctttactggaaacgcgagattatgtgaaacatgtc
atgacgaacgcgacatattacggtattttattgggtcagggcgcacaatcggtcggtaag
cgtatgcaagccattccattacgtaatacaccatag
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