Acinetobacter variabilis: RYU24_06350
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Entry
RYU24_06350 CDS
T07586
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
avb
Acinetobacter variabilis
Pathway
avb03030
DNA replication
avb03410
Base excision repair
avb03420
Nucleotide excision repair
avb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RYU24_06350 (polA)
03410 Base excision repair
RYU24_06350 (polA)
03420 Nucleotide excision repair
RYU24_06350 (polA)
03440 Homologous recombination
RYU24_06350 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avb03032
]
RYU24_06350 (polA)
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_06350 (polA)
Enzymes [BR:
avb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RYU24_06350 (polA)
DNA replication proteins [BR:
avb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RYU24_06350 (polA)
DNA repair and recombination proteins [BR:
avb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RYU24_06350 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RYU24_06350 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BCT88230
LinkDB
All DBs
Position
complement(667653..670418)
Genome browser
AA seq
921 aa
AA seq
DB search
MPPFVLVDGSYFLFRAFHALPPLTTSTGLHTNAIRGAISAIQKLMRRTQPTHMAVIFDTP
EPTFRHELSPIYKGDRPSMPEELSQQIPYLHALIRALGIPLHMLPGAEADDIIGTLAKRA
EALGHQVLISTGDKDMAQLVTDKVTLEDSFKEKPMDVDGVFEKFGVWPNQIIDYLTLMGD
ASDGIMGVPGIGAKTAAKLLNEYGSIGGILENVDKIKGKVGQNIKDNTDGIALDHQLASI
ICDLDLSFTYDDLKLQDPNVEALRNLYTELEFRNQLQSLDHPNNPNNRNYKQATQSITAK
AVPEPQEADEQQATLSSDNDQLGEATYHTVLTQEDWDKLFERLNTEKRFAFDTETTSLDY
RIAQIVGFSVAFDAQDAYYVPLAHDYEGAPEQLNREKILAQIKPILEDEAIQKIGHHLKY
DAHVLENHGIHLAGWYFDTMLASYVLNSVATRHGMDDVARLYLSHLTTTYEQVAGKGAKQ
KTFNKIEIEAAAHYAAEDAHVTYRLFEVLSKKLQTYPELVNILHNIEMPVARVLTSMEEN
GIRLDLAFLDQLGCEFAQTMQNLENQITEIAGEAFNVSSPKQVGEVLFDKLGLKGGKKTS
TGQYSTSESVLEKLEHPIAELILEYRGLSKLKSTYTDGLCKQANNDTHRVHTSYHQALTA
TGRLSSTDPNLQNIPIRAEIGRQIRKAFIAPEGRVLLAADYSQIELRLMAHLSQDDALVD
AFNHGQDVHRRTAAEVLGIPLEEVTNDQRRQAKAVNFGLLYGMSEFGLTRQLGFTRQESQ
EYIKQYFRRYPGIYEYMQRTRQVALEQGFVETILGRRLYTPDIDARNMMVRKAAERAAIN
APLQGSAADIIKMAMIEVDKMLPKDQAKMLLQVHDELVFEVDEAIADELAPQLAEVMQSV
IEISVPLVVEVGKGMNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccaccatttgtcttggtcgatggctcttactttttatttcgtgcctttcatgcacta
ccaccattaaccacgtcaaccggtctgcacaccaatgcaattcgtggtgcaatttctgct
attcaaaaactgatgcgccgtacccagccaacccatatggcggtgattttcgacacgcct
gaaccgacttttcgtcacgagctatcacctatttataaaggtgaccgtccgagcatgccg
gaagaactgtcacagcaaattccatacttacatgccttgattcgcgcattaggcattccc
ctgcatatgctgccaggtgcggaagccgatgacattattggtacactggctaaacgtgct
gaagctttaggtcatcaggtactgatttcaactggtgataaagacatggcacagctggtg
actgataaagtgaccctggaagacagtttcaaagaaaaaccaatggatgttgatggggtt
tttgaaaagtttggtgtatggccgaaccagatcattgactacctgaccctgatgggcgat
gcctcagacgggattatgggtgtgcctgggatcggagcaaaaactgcagccaaattactc
aatgaatatggctcgattggtggcattctggaaaatgtcgacaagatcaaaggtaaagtg
ggtcagaatattaaagacaataccgatggcattgcactggatcatcaattggccagcatc
atttgcgatctggatttaagcttcacttatgatgacctgaaacttcaggatccaaatgta
gaagctttacgtaatctgtataccgaactggaattccgtaaccagctacaatcactggac
catccgaataatccaaacaaccgtaattataaacaggctactcaatcgattactgccaaa
gccgtacctgaacctcaagaagccgatgagcagcaagcgacactgagcagtgataacgat
cagcttggagaagcgacatatcatactgtattaactcaggaagattgggacaagctgttt
gaacgtttaaatactgaaaaacgctttgcttttgatactgaaaccaccagtttggattat
cgtattgcacagattgtcggtttttcggtggcttttgatgcacaggatgcctattacgta
ccattggcacatgattatgaaggtgcaccagaacagctaaatcgtgaaaaaattctggct
cagatcaaaccgattttagaagatgaagcgattcagaaaattggccaccacctgaaatat
gatgcgcatgttctggaaaatcacggcattcatctggcgggctggtattttgataccatg
ctggcttcttatgtgctgaactcggttgccacccgtcatggcatggatgatgtggctcgt
ctgtacttaagccacttaaccacgacctatgaacaggtggcaggtaaaggcgccaaacaa
aaaactttcaataaaatcgagatcgaagccgcagcacactacgccgcagaagatgcacat
gtgacctatcgtctgtttgaagtactcagcaaaaagctgcagacttatcctgaactggtc
aatattctgcataatattgaaatgccagtagcccgtgtgctgaccagtatggaagaaaat
ggcatccgactggatctggcttttctggatcaactcggttgtgagttcgctcaaaccatg
cagaatctggaaaatcagatcacggaaatagccggtgaagcgtttaatgtcagctctccg
aaacaggtcggtgaagttctgtttgataaactaggcctaaaaggtggcaaaaagacctct
accggtcagtacagcaccagtgaaagtgtgctggaaaaactggaacacccgattgctgaa
cttattctggagtatcggggtctgtctaaactgaaaagtacctataccgatggtctatgc
aagcaggccaataatgacacccatcgtgtgcataccagttatcatcaggcactgactgca
accggccgtttatcgtctactgatccaaacctgcagaacattccaattcgtgcggaaatc
ggacgtcagattcgtaaggcctttattgcgcctgaaggccgtgtcttactcgcagccgat
tattcacagattgaattgcgtctgatggcacatttatctcaggatgatgcgctagtagat
gcctttaaccatggacaggacgtgcaccgccgtaccgcagctgaagttctgggtatcccg
cttgaagaagtaaccaatgatcagcgtcgtcaggctaaagccgtgaacttcggtctgctc
tatggcatgtctgaatttggcctgactcgtcagttaggttttactcgtcaggaatcccag
gaatatatcaaacagtatttccgtcgttatccggggatttatgaatatatgcagcgtacc
cgtcaggtggcattggaacaaggcttcgttgaaaccattctaggccgccgtttatacaca
cctgatatcgatgcccgtaacatgatggtccgcaaagccgctgaacgtgctgcgattaat
gcaccattacaaggttcggctgcagacatcattaaaatggcgatgattgaggttgataaa
atgctacctaaagatcaggccaaaatgctgctacaagtccacgatgaattggtatttgaa
gtcgatgaagcgattgcagatgaactggcacctcaactggctgaagtgatgcaatccgtg
attgaaatttctgtgcctttggtcgtggaagttggtaaaggcatgaactgggatgaggca
cactaa
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