Acinetobacter variabilis: RYU24_07900
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Entry
RYU24_07900 CDS
T07586
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
avb
Acinetobacter variabilis
Pathway
avb00300
Lysine biosynthesis
avb01100
Metabolic pathways
avb01120
Microbial metabolism in diverse environments
avb01230
Biosynthesis of amino acids
Module
avb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RYU24_07900 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avb01002
]
RYU24_07900 (dapE)
Enzymes [BR:
avb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RYU24_07900 (dapE)
Peptidases and inhibitors [BR:
avb01002
]
Metallo peptidases
Family M20
RYU24_07900 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
DUF3224
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
BCT88385
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Position
complement(833712..834848)
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AA seq
378 aa
AA seq
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MTSSATLDLSLQLLRQPSVTPIDHDCQNIMAERLKKVGFDIESMRFEDVDNIWARKGTEG
PVFCFAGHTDVVPTGNLDAWNSDPFAPEIRDGKLYGRGSADMKTALAAMVVATERFVEKY
PNHKGSIAYLITSDEEGPSINGTVKVIETLEARNEKITWCLVGEPSSTNKLGDIVKNGRR
GSLNANLTVKGKQGHVAYPHLAVNPIHTASKAIAELCETVWDNGNEYFPATSFQISNINA
GTGATNVVPGTMNLLCNWRYSTEVTAEELKARMLEILDRHGVDYEISWTLSGLPFLTPVG
ELVNAAKDAILTVTSTETELSTSGGTSDGRFIAPTGAQVLELGVLNATIHQINEHVDIAD
LEPLAEIYEQILVNLLAN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacatcttccgcgactcttgatttaagcctgcaattattacgtcagccttctgtgacc
cctattgatcatgactgccagaatatcatggcagaacgtttgaaaaaggtgggtttcgat
attgaatcaatgcgttttgaagatgttgataatatttgggcgcgtaaaggtactgaaggc
cctgttttctgttttgctggccataccgatgttgtaccgaccggcaacctggatgcttgg
aactctgacccatttgcgccagaaattcgtgatggtaagctttatggccgtggtagcgcc
gacatgaaaacggctttggctgcgatggttgtagccactgaacgttttgtcgaaaaatat
ccaaatcataaaggctcaattgcctatctgatcacttcagatgaagaaggtccatcgatc
aatggtacagtaaaagtgattgaaactctggaagcccgtaatgagaaaattacctggtgt
ctggtaggtgaaccatcaagtaccaacaaactgggggatattgtcaaaaatggtcgtcgc
ggttcgttgaatgccaacctgactgtcaaaggcaaacaaggtcatgtggcttatccccac
ttagcagtgaatccaatccatacagcgtctaaagccattgccgaactgtgcgaaacagtc
tgggataatggcaatgaatacttccctgcgacgtctttccagatttcaaatatcaatgcc
ggtactggtgcaaccaacgttgttccgggcaccatgaatctgttgtgcaactggcgttat
tcaactgaagtgactgctgaagaactaaaagcacgtatgctggaaattctggaccgtcat
ggtgtggattatgagatttcatggactttatccggactgccattcctgacaccagtaggt
gagctggtgaatgccgctaaagatgccattttaacggtgactagtactgaaactgaatta
tcaacttcaggcggcacctcagatggtcgatttattgcgcctaccggtgcacaggtgctg
gaactcggtgtactgaatgccacgatccatcagattaatgagcatgtcgatattgcagat
cttgaaccactggctgaaatttatgagcagattctggtgaacctgttagccaattaa
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