Acinetobacter variabilis: RYU24_08390
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Entry
RYU24_08390 CDS
T07586
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
avb
Acinetobacter variabilis
Pathway
avb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RYU24_08390 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
avb01007
]
RYU24_08390 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avb03016
]
RYU24_08390 (serS)
Enzymes [BR:
avb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RYU24_08390 (serS)
Amino acid related enzymes [BR:
avb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RYU24_08390 (serS)
Transfer RNA biogenesis [BR:
avb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RYU24_08390 (serS)
Prokaryotic type
RYU24_08390 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
At4g38062_N
DUF4894
DUF2203
Kelch_1
Uso1_p115_C
DUF7307
Motif
Other DBs
NCBI-ProteinID:
BCT88434
LinkDB
All DBs
Position
884914..886185
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AA seq
423 aa
AA seq
DB search
MIDPKLLRNNIEAVNLALAKRGVQLNVEEWASLEARRKEIQSKTESLQAERNAGAKQVGQ
IKKAGGDASEIMARMSAIGDEIKAAEAALAELQAELEEKSLSIPNLPDESVPEGKDENDN
VEVLKWGTPREFDFEIKDHTDLGEMMGGLEFETATKLTGSRFSVLKGPLARLQRAITQFM
LDTHTTKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEFYLIPTAEVPVTNFV
RDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPEDSMQALE
ELTGHAEGILQALGLPYRKIILCGGDMGFGACKTYDLEVWVPSQNTYREISSCSNMWDFQ
ARRMKARYRADQKKTEFVHTLNGSGLAVGRTLLAVMENYQRADGSIEIPEVLRPYMGGAT
YID
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacccgaaattacttagaaataatattgaggctgtaaatttagccttggcaaaa
cgtggtgttcaactgaatgttgaggaatgggcatcattagaagctcgacgtaaagagatt
caatccaaaactgaatccttgcaagctgagcgtaatgccggtgccaagcaagtgggtcag
atcaaaaaagcaggtggcgatgcctctgaaatcatggcacgcatgtctgcaattggtgat
gaaatcaaggctgctgaagctgcactggctgagctgcaagctgaactagaagaaaaatca
ctgtctattccaaacctgccagatgaatctgtacctgaaggtaaagatgaaaatgacaat
gtggaagtcctgaaatgggggacaccacgcgaatttgactttgaaatcaaagaccatact
gacctgggcgaaatgatgggtggtctggaatttgaaactgcgaccaaattgactggttca
cggtttagcgttctgaaaggtcctttagcgcgtctgcaacgtgccatcactcagtttatg
ctggatacgcataccactaaaaatggctataccgaagcctatgtaccttatttggtgaat
gcagattctttacgtggtacaggtcagttaccgaaatttgaagaagacctgttcaagctg
caaggtgagaaagaattctacctgatccctacggctgaagtacctgtaaccaacttcgtg
cgtgatgaaatcatcgatgccgaccgtctgccactgaaatatgcagcacataccccatgt
ttccgtagtgaagccggttcatatggccgtgatacccgtggtctgatccgtcaacaccag
ttcgacaaagttgagatggttcagattgtaaaacctgaagactctatgcaggcactggaa
gagttaactggtcatgcagaaggtattttgcaagcattaggtctaccataccgtaaaatc
attctgtgtggcggtgatatgggctttggtgcatgcaaaacttatgaccttgaagtctgg
gtgccaagtcaaaatacgtatcgtgagatttcatcttgctcaaatatgtgggatttccag
gcacgccgtatgaaagcgcgttaccgtgctgaccagaaaaaaactgaattcgtacatacg
ctgaatggttcaggtctggctgtaggtcgtactttactggcggtcatggaaaactatcaa
cgtgctgatggttcaattgagatccctgaagtactgcgtccgtatatgggtggtgcaact
tacatcgactaa
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