Acinetobacter variabilis: RYU24_09320
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Entry
RYU24_09320 CDS
T07586
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
avb
Acinetobacter variabilis
Pathway
avb00300
Lysine biosynthesis
avb00470
D-Amino acid metabolism
avb01100
Metabolic pathways
avb01110
Biosynthesis of secondary metabolites
avb01120
Microbial metabolism in diverse environments
avb01230
Biosynthesis of amino acids
Module
avb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RYU24_09320 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RYU24_09320 (lysA)
Enzymes [BR:
avb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RYU24_09320 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BCT88527
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Position
980767..982011
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AA seq
414 aa
AA seq
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MSFTRINGVLHAEQCSLQQLAEQFGTPLYVYSKATFEKHYLDMDRAFSFIDHQICFAVKS
NSNLAVLNVLVKQGAGFDIVTGGELARVLKAGGEPSKIVFSGLGKSEADIKKALEVGIAC
FNVESYAELDRIQKVAAELKVKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDSVFDT
YAYAASLPNLEVVGIDCHIGSQLTETQPFVDALDRVIVMIDKLKDMGINLKHIDIGGGLG
VTYKDETPPSVEEYANAMRPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTNHRNFA
IIDAAMNDLIRPALYEAWMDIQSVTPRTDMETKEWDVVGAICETGDFLGKERELAIKEND
VLAVLGAGAYGFVMSSNYNSRGRAAEVMVDGEQAHLIRERETVESLWERERLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcacccgcattaatggggtattgcatgctgagcaatgttcactgcaacagctc
gcagagcaatttggcacaccactttatgtctattcaaaagcaacttttgaaaagcattat
ctggatatggaccgtgcttttagctttatcgatcatcaaatctgttttgcggtaaagtca
aactctaatcttgcggtattgaatgtattggtcaagcagggtgctggtttcgatatcgtg
actggtggtgaactggctcgtgtattgaaagccggtggtgaaccttcaaaaatcgtattc
tcaggtctgggtaaatcagaagcagatattaaaaaggcattagaagtaggcatcgcctgt
tttaatgtcgagtcatatgccgaactggaccgtattcagaaagtagcggctgaacttaag
gttaaagcgccaatttcactacgtgtgaatccggatgtcgatgccaaaacccatccatat
atttcaacaggcttaaaagaaaacaaatttggtattccatcagatagcgtatttgatacc
tatgcttatgcagcatcattgccaaatcttgaagtggtcgggattgactgtcatatcggt
tcgcagttgaccgaaactcagccttttgttgatgcgctggatcgtgtcattgttatgatc
gacaagctgaaagacatgggcatcaacttgaaacacatcgatatcggtggtggtctaggt
gtgacgtataaagatgaaacaccgccatcggttgaagaatatgccaatgccatgcgtccg
gctttagaaaaactgggcctgaaagtttatatggagccgggtcgtagtatctctgccaat
gcaggtgttttactgaccaaagtggatctgctgaaaccaaccaatcaccgtaactttgcc
atcattgatgccgcgatgaatgacctgattcgtccagctttatatgaagcatggatggat
attcaatccgtgacaccgcgtacggatatggaaacaaaagaatgggatgtggtgggcgca
atctgtgaaactggcgattttttgggtaaggaacgtgagcttgccattaaagaaaatgat
gtgctggcagtactgggtgctggtgcatatggtttcgtaatgagttcaaactataacagt
cgtggtcgtgctgctgaagtaatggtggatggtgagcaggcgcatctgattcgtgagcgt
gaaacggttgaatcactttgggaacgtgagcgtttattgccttaa
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