Acinetobacter variabilis: RYU24_12500
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Entry
RYU24_12500 CDS
T07586
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
avb
Acinetobacter variabilis
Pathway
avb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RYU24_12500 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_12500 (ung)
Enzymes [BR:
avb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RYU24_12500 (ung)
DNA repair and recombination proteins [BR:
avb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RYU24_12500 (ung)
Prokaryotic type
RYU24_12500 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
OB_SHLD2_2nd
Motif
Other DBs
NCBI-ProteinID:
BCT88845
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All DBs
Position
1311681..1312394
Genome browser
AA seq
237 aa
AA seq
DB search
MSLNEQQIAKLNKVQLDDSWKYGLSDFLLSPKMDALKTFLIEEKKADKVIYPPNHLIFNA
LNTTPLDRVKVVIIGQDPYHGPNQAHGLSFSVQKGVALPPSLRNIFHELHNDLGVKIPKH
GDLTHWAEQGVLLLNAVLTVEAAQPTSHQKRGWEEFTDHVIDVLNEQREHIVFILWGAYA
QRKGQRIDQNKHLVLKAAHPSPLSANRGGFFGCKVFSKTNNYLKQHGIEPIDWQLDA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaatgaacagcaaattgccaaactgaataaagttcagttagatgacagctgg
aaatatggactcagtgattttttactgagcccgaaaatggatgcgttaaaaacgttttta
attgaagaaaaaaaagcagacaaggtaatttacccaccaaatcatctgatttttaatgct
ttgaatacaacgccattagaccgggtcaaagtggtcatcattggtcaggacccttatcat
ggcccgaatcaggcgcatggtttaagcttctcggtgcaaaaaggggttgcattacctcca
tctttacgtaatatttttcatgagttacataatgatttaggcgtaaaaatccctaaacat
ggtgatttaactcattgggcggaacagggtgtacttctgctcaacgctgtattgactgta
gaggcagcacagccaacttcacatcagaaacgtggctgggaggaattcacagatcacgtc
attgatgtattgaatgaacaacgtgaacatatcgtttttattctttggggcgcatacgca
cagcgtaaaggacagcgcattgatcaaaataaacacctggtcttaaaggcagcacatcct
tcgcctttgtcagcaaaccggggtggtttttttggttgtaaagttttttcgaaaacgaat
aattatctcaaacaacatggcattgagcctatagattggcagctggacgcatga
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