Acinetobacter variabilis: RYU24_12560
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Entry
RYU24_12560 CDS
T07586
Symbol
himD
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
avb
Acinetobacter variabilis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avb03032
]
RYU24_12560 (himD)
03036 Chromosome and associated proteins [BR:
avb03036
]
RYU24_12560 (himD)
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_12560 (himD)
DNA replication proteins [BR:
avb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RYU24_12560 (himD)
Chromosome and associated proteins [BR:
avb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RYU24_12560 (himD)
DNA repair and recombination proteins [BR:
avb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RYU24_12560 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
BCT88851
LinkDB
All DBs
Position
1317181..1317486
Genome browser
AA seq
101 aa
AA seq
DB search
MTTEALNKSDLIERIALKNPHLAEPLVEEAVKIMIDQMIEALSSDNRIEIRGFGSFALHH
REPRVGRNPKTGKSVEVAAKAVPHFKPGKALRDAVNESANK
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgactactgaagcacttaataagtctgacttaatagagcgcatcgcgctaaagaatccg
catttagctgaacctttagtggaagaagcagttaaaattatgattgatcaaatgattgaa
gctttatcatctgataaccgtattgagattcgcgggtttggcagctttgcattacatcat
cgtgagcctcgcgtgggtcgtaatcctaaaactggtaaatctgttgaagttgcagcaaaa
gctgttccacactttaagccaggtaaagcacttcgtgatgcagtaaacgaatctgcaaac
aaataa
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integrated database retrieval system
