Acinetobacter variabilis: RYU24_14420
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Entry
RYU24_14420 CDS
T07586
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
avb
Acinetobacter variabilis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avb03016
]
RYU24_14420 (rnd)
Enzymes [BR:
avb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RYU24_14420 (rnd)
Transfer RNA biogenesis [BR:
avb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RYU24_14420 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
BCT89037
LinkDB
All DBs
Position
1496434..1497525
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AA seq
363 aa
AA seq
DB search
MDQNPVYGLDTEFIKVDTLWPKLGVFQINVNNNVYLLDGTTLDLSEFLNKIFNAQQNIFH
ACSEDIDLIYHYTQKKALSNVFDTQVGMSFLGHGLQVSYQNALKQMLDVDIEKDQTRSNW
LARPLSSEQLLYAANDVHYLVQLSDKVKQDLESKYLLDFALEDCRFLTHEIGEETPTALL
YQDVGNYRHSRRQLMQLQQLAVWREQIAKALNQPRSFILKNSTMIDLVEKFPRNNFQLSQ
IKDIRANIVREHGKTILDLLKFLPDQAEWPLRLARPIRHSSREIGEKVETMIQNISNEIS
VPKEVLMRKKWLNALYQHVVCHKDEQDLPNYLLGWRYELLTLPLIKVLHQDESYLSTQMK
VVE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaatccggtctatggcctggatacagaattcattaaggtagacaccttgtgg
ccaaaacttggtgtttttcaaatcaatgtcaataacaatgtctatttgctggatggaaca
acactggatctgagtgaatttctgaacaagatttttaatgctcaacagaatattttccat
gcctgcagtgaagacattgacctgatttaccattacacccagaaaaaagccctgagtaat
gtctttgatacacaggtcggtatgtctttcctcggacatggtttgcaggtcagctatcag
aatgctttgaaacagatgctggatgtcgatattgaaaaagatcagactcgctctaactgg
ctggcacgtcctttaagctctgagcagttgctgtatgcagccaatgatgtgcattatctg
gtgcaactgtcggataaagtcaaacaggatctggaaagcaagtatctgctcgatttcgct
cttgaagattgccgttttttgacccatgaaattggtgaagaaacaccgactgccttgctt
tatcaggatgtcggtaattatcgtcattcacgccgtcaattaatgcagttacaacaactg
gctgtatggcgtgagcagattgccaaggcgctgaatcagccacgcagcttcattctgaaa
aactcgaccatgattgatctggtagagaaattccctcgcaataatttccagctcagtcag
ataaaagacatccgggccaatattgtccgcgaacatggcaagaccattttggatctgttg
aaattcctgcctgatcaagccgaatggccgctgcgtctggcacgtccaattcgccattca
tccagagagattggcgagaaggtcgaaacaatgatccagaatatatccaatgaaatctct
gtaccgaaagaagtgctgatgcgcaagaaatggctgaatgccttatatcagcatgtggta
tgtcataaggatgaacaggatctgccaaactacttgctcggctggcgctatgagttatta
actctgccactaattaaggtattgcatcaggatgagtcttatttgtcgacccagatgaaa
gtagttgagtga
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