Acinetobacter variabilis: RYU24_17530
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Entry
RYU24_17530 CDS
T07586
Symbol
hup
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
avb
Acinetobacter variabilis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avb03032
]
RYU24_17530 (hup)
03036 Chromosome and associated proteins [BR:
avb03036
]
RYU24_17530 (hup)
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_17530 (hup)
DNA replication proteins [BR:
avb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RYU24_17530 (hup)
Chromosome and associated proteins [BR:
avb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RYU24_17530 (hup)
DNA repair and recombination proteins [BR:
avb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RYU24_17530 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
BCT89348
LinkDB
All DBs
Position
complement(1821145..1821417)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAEKGGLSKADAGKALDATIASVTEALKAGDTVTLVGFGTFGVKERAARTG
RNPQTGATLEIKASKVPSFKAGKGLKDAVA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaattaattgatgcaattgcagagaaagggggattatctaaggctgac
gcaggtaaagctttagatgctacaattgcttctgttactgaagctttaaaagcgggtgat
acagtaactctagttggtttcggtactttcggcgttaaagagcgtgctgcacgtactggc
cgtaatccacaaactggtgctactcttgaaattaaagcaagcaaagtacctagcttcaaa
gcaggtaaaggcttaaaagacgctgttgcttaa
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