Acinetobacter variabilis: RYU24_19390
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Entry
RYU24_19390 CDS
T07586
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
avb
Acinetobacter variabilis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avb03021
]
RYU24_19390 (rpoH)
Transcription machinery [BR:
avb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RYU24_19390 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
DUF7645
Sigma70_r1_2
UPF0231
Motif
Other DBs
NCBI-ProteinID:
BCT89534
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All DBs
Position
2005788..2006657
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AA seq
289 aa
AA seq
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MSDSRNQLMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAERYYYDQDLDAAKMLVMS
HLRFVVHIARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPSMGVRLVSFAVHWIKAEIHEY
VIRNWRIVKIATTKAQRKLFFNLRSLKKSSKKLTLEEAQSIANDLNVTPEQVLEMEGRLT
AYDAAFEASGDDDDENSTHVAPALYLEDNRYDPARLIENEDYEEQSTSALHEAMEQLDDR
SRNILQRRWLDDEKSTLHELAAEYNVSAERIRQLEKNAMEKIKVAMSSN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacagccgcaatcaattgatgcctctgtcattatcggcgccaggtgtcaatctt
ggtgcttatattagcactgtcaatcaaattcctattttaacggccgaacaagaaaaagag
ttggccgaacgctattactacgaccaagacttggacgcagcaaaaatgctggttatgtct
catttgcgtttcgtggtgcatattgcacgtagttatgcaggttatggcctgcctcaaggt
gacctgattcaggaaggcaaccttggcctgatgaaagccgttaaacgttttgacccgagt
atgggcgtacgtctggtgtcatttgcggtgcactggatcaaagctgaaattcatgaatat
gtaattcgtaactggcgtattgtcaaaattgcgactactaaagcgcaacgtaaactgttc
ttcaatttacgtagcctgaaaaagtcttctaaaaagttaacgcttgaagaagcccagtcg
attgccaatgacctgaatgtaacgccagaacaggttctggaaatggaaggccgattgact
gcttatgatgcggcatttgaagcatcaggtgacgatgatgatgaaaattcaactcacgtt
gctccagcactatatctggaagacaaccgttatgacccggcacgtctgattgaaaatgaa
gactatgaggaacaaagcacctctgccctgcatgaagcaatggaacagctagatgaccgt
tcccgcaatatcttgcagcgtcgctggctggatgatgaaaaatcaaccttgcatgaactg
gcagctgaatataatgtttccgccgaacgtattcgtcagcttgaaaagaatgcaatggaa
aaaatcaaagtggcaatgtcttcaaactga
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