Acinetobacter variabilis: RYU24_21610
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Entry
RYU24_21610 CDS
T07586
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
avb
Acinetobacter variabilis
Pathway
avb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RYU24_21610 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avb03019
]
RYU24_21610 (groL)
03110 Chaperones and folding catalysts [BR:
avb03110
]
RYU24_21610 (groL)
03029 Mitochondrial biogenesis [BR:
avb03029
]
RYU24_21610 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avb04147
]
RYU24_21610 (groL)
Enzymes [BR:
avb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RYU24_21610 (groL)
Messenger RNA biogenesis [BR:
avb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RYU24_21610 (groL)
Chaperones and folding catalysts [BR:
avb03110
]
Heat shock proteins
HSP60 / Chaperonin
RYU24_21610 (groL)
Mitochondrial biogenesis [BR:
avb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RYU24_21610 (groL)
Exosome [BR:
avb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RYU24_21610 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RYU24_21610 (groL)
Exosomal proteins of breast cancer cells
RYU24_21610 (groL)
Exosomal proteins of colorectal cancer cells
RYU24_21610 (groL)
Exosomal proteins of bladder cancer cells
RYU24_21610 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCT89756
LinkDB
All DBs
Position
complement(2250169..2251803)
Genome browser
AA seq
544 aa
AA seq
DB search
MSAKDVKFGDSARSKMIAGVNILADAVKVTLGPKGRNVVIDRSFGAPHITKDGVSVAKEI
TLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGI
DLAVKTVVENIKQTAKPASDSKAIEQVGSISANSDTTVGSLIAQAMEKVGKEGVITVEEG
SGFEDSLDVVEGMQFDRGYISPYFANKQDTLTAELESPYILLVDKKISNIRELITVLEAV
AKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGMQLDQTSLEHLGTAHKVTVSKENTVIVDGAGDANQISERVQQIRAQIEESTSEY
DKEKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALV
RAASALDGLTGANDDQNVGINILRRAIEAPLRQIVANAGDEPSVVINAVKNGEGNYGYNA
ATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITEIPEEKPAMPDMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaaagacgtaaaatttggtgattcagctcgttcaaaaatgattgctggtgtg
aacatccttgcagatgcggtgaaagtgactttaggtcctaaaggccgtaacgttgtaatc
gaccgttctttcggtgcaccgcacatcactaaagatggtgtatctgttgcgaaagaaatc
accctaaaagacaaattcgaaaatatgggtgcgcaactggttcgtgaagtttcttcaaaa
accaatgatatcgcaggtgacggtacaacgactgcgactgtattggctcaagcaatcctg
aacgaagggatcaagtcagtaacagcgggtatgaacccaatggatctgaaacgcggtatc
gaccttgcagtgaaaactgttgttgaaaatattaaacaaactgcaaaaccagcttctgac
tctaaagcgattgagcaagttggttcgatctctgcaaactctgacaccactgttggttct
ctgattgcacaagcaatggaaaaagtgggcaaagaaggcgtaatcactgttgaagaaggt
tcaggctttgaagattcgcttgatgttgtagaaggtatgcagtttgaccgcggttatatc
tctccatacttcgcaaacaaacaagacactttaactgctgaacttgaaagcccatacatc
ctgttggttgacaagaaaattagcaatatccgtgaattgatcactgttttggaagctgtt
gcgaaaactggtaagcctcttcttatcatcgctgaagatgttgaaggcgaagcactagca
actcttgttgtaaacaacatgcgcggcattatcaaagtatgtgctgttaaagctcctggc
ttcggtgaccgtcgtaaagcaatgcttcaagatatcgcgatcctgacaggcggtactgtg
atttctgaagaaatcggtatgcagttagatcaaacttcacttgaacacttaggtactgcg
cataaagtaactgtatctaaagaaaatacagtgattgttgatggtgctggtgatgcaaat
cagatttctgagcgtgttcagcaaattcgtgcacaaatcgaagaatctacttctgaatac
gacaaagaaaaacttcaagaacgtgttgctaaattggcaggtggtgtagcagttatcaaa
attggtgctgcaactgaagttgaaatgaaagagaagaaagaccgtgtagacgacgcactt
cacgcaactcgtgctgcagttgaagaaggtgttgttgcaggtggtggtgttgcactggta
cgtgctgcatctgcacttgatggtttaactggtgcaaacgatgaccaaaacgttggtatt
aatatccttcgtcgtgcaatcgaagctcctcttcgtcaaatcgtagcaaatgctggtgat
gagccatctgtagtgatcaatgctgtgaagaacggtgaaggtaactatggctataacgct
gcgacaggcgaatacggtgacatgctggaaatgggtatcctggatcctgcgaaagtaact
cgttcagcacttgagcatgcagcttctgttgctggcttgatgttaacaacagaatgtatg
attactgaaattccagaagaaaaaccagctatgcctgatatgggcggcatgggtggtatg
ggcggtatgatgtaa
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