Acinetobacter variabilis: RYU24_25570
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Entry
RYU24_25570 CDS
T07586
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
avb
Acinetobacter variabilis
Pathway
avb03030
DNA replication
avb03430
Mismatch repair
avb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RYU24_25570 (holA)
03430 Mismatch repair
RYU24_25570 (holA)
03440 Homologous recombination
RYU24_25570 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avb03032
]
RYU24_25570 (holA)
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_25570 (holA)
Enzymes [BR:
avb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RYU24_25570 (holA)
DNA replication proteins [BR:
avb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RYU24_25570 (holA)
DNA repair and recombination proteins [BR:
avb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RYU24_25570 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
BCT90152
LinkDB
All DBs
Position
2688074..2689072
Genome browser
AA seq
332 aa
AA seq
DB search
MKLDYLQALKRVNEARGAWVLHGQEPLLEQNLVDAFRSSWQSREVERQRYDISSASDWKN
VFNALNSLSLFSSQLAIEVHGNIKPDASGLKLLKNYLQQDSDNLLLVVMPKQDSSSLKSS
FFQTIDANGVNVSLVANYPKDRQQILGIEAEKLGIKLANDAWQWLEQHHEHNLLAAKNSL
MRVADTFAEVDIIQIDHLYACLQDQSRYNTYDLSDALLNGNLAQSIKIFQYLIASGEPMS
LILWSISKEMRLLMQLFEQPQNALQIGIWKTKVSLYQQALRRLSPQRFLSWPQLLIRIDA
AIKGMSRENPEHLILQAIAEMCGQSLFTSPSA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgattacctccaggcattaaaacgtgtcaatgaagctcgcggtgcctgggtg
ttgcatggtcaggaacctttgctggaacagaatctggtagatgcctttcgtagcagctgg
caaagccgtgaagttgaacgccagcgttatgatattagctctgcctctgactggaaaaat
gtcttcaatgctttaaacagcctgtcattattttctagccaattggcaattgaagtgcat
ggcaatatcaaacctgatgccagcggtctcaaactgttaaaaaactatctgcaacaggac
agtgataacctgctgttggtggtcatgccgaagcaggattccagcagtctgaaatccagc
tttttccagaccattgatgccaatggcgtgaatgtatcactggtagcgaactacccaaaa
gatcgtcaacagatcctcgggattgaagcggaaaaactgggaattaagctggccaatgat
gcctggcaatggttagagcagcatcatgaacacaatttactagctgccaaaaatagcctg
atgcgagtggcggatacctttgctgaagtagatattatccagattgaccatctgtatgcc
tgcttgcaggaccagtcccgttacaacacctatgacctgagtgatgccctgctcaatggg
aatctagcgcaatcaattaagattttccagtatctgattgcatcaggcgagccaatgagc
ctgattttgtggagtatcagcaaagaaatgcgtctattgatgcaattatttgaacagcca
caaaatgccttacaaatcggtatctggaagactaaagtgagcttatatcagcaagccttg
cgtcgtttaagtccacagcgctttttaagctggcctcagcttttgatccggatcgacgct
gcaatcaaagggatgtccagagagaaccctgaacatctgatcttgcaggccattgctgaa
atgtgtggtcaaagcttgtttacatccccgagtgcctaa
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