Acinetobacter variabilis: RYU24_25650
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Entry
RYU24_25650 CDS
T07586
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
avb
Acinetobacter variabilis
Pathway
avb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RYU24_25650 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avb03019
]
RYU24_25650 (orn)
03009 Ribosome biogenesis [BR:
avb03009
]
RYU24_25650 (orn)
Messenger RNA biogenesis [BR:
avb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RYU24_25650 (orn)
Ribosome biogenesis [BR:
avb03009
]
Eukaryotic type
Pre-60S particles
RNases
RYU24_25650 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF4543
Motif
Other DBs
NCBI-ProteinID:
BCT90160
LinkDB
All DBs
Position
complement(2697886..2698440)
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AA seq
184 aa
AA seq
DB search
MSSTPDSRLIWIDLEMTGLDTDNDQIIEVATIVTDDNLNILAEGPVLAVHQSDRILNAMD
EWNTRQHGQSGLIERVRRSKLTAQDAERETIEFLKKWVNPKVSPMCGNSICQDRRFLHRL
MPELEQYFHYRNLDVSSVKELAKRWRPEIMSGLKKNASHLAMDDIRDSIAELKYYREYFF
IMNK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccccggatagccgcctgatttggattgacctggaaatgacaggtctggat
acagacaatgaccagattattgaagttgccacgattgtaacggacgataacctaaatatt
cttgccgaagggcccgtgctagctgtgcatcaatctgaccgtatcctgaatgcgatggac
gagtggaatactcgccagcatggtcagtctggcctgattgagcgcgtacgccgcagtaaa
ttgactgctcaggatgcagaacgtgaaaccattgaattcctgaaaaaatgggtgaatcca
aaagtatcgcctatgtgtggtaactcgatctgtcaggatcgtcgctttctgcaccgttta
atgcctgaactggaacagtatttccattaccgtaatctggacgtatcttcagtaaaagag
ttggcaaaacgctggcgtcctgaaatcatgagtggcctgaagaaaaatgcttcgcatcta
gccatggatgacattcgtgattcgattgctgaactgaaatattatcgtgaatatttcttc
attatgaataaataa
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