Acinetobacter variabilis: RYU24_28830
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Entry
RYU24_28830 CDS
T07586
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
avb
Acinetobacter variabilis
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avb03400
]
RYU24_28830 (phrB)
Enzymes [BR:
avb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RYU24_28830 (phrB)
DNA repair and recombination proteins [BR:
avb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RYU24_28830 (phrB)
Prokaryotic type
RYU24_28830 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCT90478
LinkDB
All DBs
Position
3048145..3049554
Genome browser
AA seq
469 aa
AA seq
DB search
MQLIWFRQDLRIHDHAALWHATQQGPCIALAVLSPEQWQLHQDARIKTDFYLRRLKYLKQ
QLQQLNIPLIILNIPLWENLAPEILNLCQTLKIESLHANIEVGVNELERDAQVQQLLQQQ
QIRVEFYHDRILFPLGSIRNQSNQAYQVYSAFKKKCYERLILDVPACYPEIEAQDPIQLS
TKLPNVDLEKFSADYVVEHAAQLWPAEDRTALDLLDDFIEDKMAHYKTDRDLPAVDGTSR
LSPYLNIGVISVRQCMQALFQDGYFQIEDVGQQTWLDELLWREFYLQTLFDFPRVSKHQP
FKQNTHKIQWRNAPEDLAAWQQGQTGIPIVDAGMRQMLATGWMHNRVRMITAMFLCKNLL
IDWRLGESWFMQHLIDGDLAANNGGWQWCASTGMDAVPYFRIFNPVSQSLKFDPNGDYIR
EWVPELAHLDAKSIHEPYAKNPDLQLDYPKPIVDLKQSRIRAIEVFKNL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgatctggttccgccaagacctccgtatacatgaccatgccgcactctggcat
gctactcagcaaggaccttgcattgcgctagcagtcctctctcccgaacaatggcaactg
catcaggatgcccggatcaaaactgatttttatctgcgtcggctcaaatatttaaaacag
cagctacagcaactgaatatcccgctgatcatattgaatattcctttgtgggaaaattta
gcgccagaaatattgaatctgtgtcaaaccctgaaaattgaaagcttgcatgccaatatc
gaagttggcgtcaatgaactggaacgtgatgctcaggtacagcaattactgcaacagcag
caaatcagggtcgagttctatcatgatcgcatcctgtttccccttggcagtatccggaat
cagtctaatcaagcctatcaggtctatagtgcctttaagaaaaaatgctatgagcggcta
attctggatgtacccgcctgctatccagagattgaagctcaagatccaatccaattatca
actaagctccccaatgttgatcttgaaaaattctcagcggattatgtggtagagcatgct
gcccaactttggcctgcggaggatcgaactgcattggatctgctcgatgattttatcgag
gacaaaatggctcattataaaaccgaccgtgatctgccagcagttgatggtaccagccgc
ctctccccttatctgaatatcggtgttatttcagttcgccaatgtatgcaagctcttttt
caggatggctatttccagattgaggatgtgggtcagcagacctggttagatgaactcttg
tggcgggaattctatctacagaccctgtttgattttccacgtgtctccaaacaccaacca
tttaagcaaaatacccataagatccaatggcgcaatgcccccgaagatctagctgcctgg
cagcaaggccagaccggaattccaattgtcgatgctggcatgcggcaaatgctggcaact
ggctggatgcataaccgggtcaggatgattactgcgatgttcctgtgtaagaacttgctg
atcgactggcgactgggtgaaagctggtttatgcagcatctgattgatggcgatctggct
gcgaataatggcggctggcaatggtgcgcatcaaccggcatggatgctgtgccctacttc
cggatttttaatccggtcagccagtccctgaagtttgatcccaatggagactatatccgc
gagtgggtgcctgaactggcgcatctggatgccaaatccattcatgaaccttatgccaaa
aatccagatttacagctggattatccaaaaccgattgtcgatttaaagcagtcgcgtata
cgggcgattgaagtattcaaaaatctgtaa
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