Acinetobacter variabilis: RYU24_29100
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Entry
RYU24_29100 CDS
T07586
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
avb
Acinetobacter variabilis
Pathway
avb00470
D-Amino acid metabolism
avb00550
Peptidoglycan biosynthesis
avb01100
Metabolic pathways
avb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
avb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RYU24_29100 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RYU24_29100 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RYU24_29100 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
avb01011
]
RYU24_29100 (ddlB)
Enzymes [BR:
avb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RYU24_29100 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
avb01011
]
Precursor biosynthesis
Amino acid ligase
RYU24_29100 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
GARS_A
ATPgrasp_YheCD
TTL
Synapsin_C
Motif
Other DBs
NCBI-ProteinID:
BCT90505
LinkDB
All DBs
Position
complement(3081250..3082179)
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AA seq
309 aa
AA seq
DB search
MSNASKFGKVAVLLGGKSAEREVSLDSGTAVLEALVRSGINAEAFDPQERSVTELVNYDR
AFVVLHGRGGEDGQIQGALEWLNIPYTGTGVQGSAIGMDKVKTKQVWQGSELPTAPYRIV
TKNSNAQEIVSALDLPLIIKPVHEGSSIGMSKVEKVEDFADAIAKATEHDAVVMAEKWIT
GREFTIVILNGQALPVIRLQPPEDVAFYDYEAKYQRNDVEYGIPCGLSESEEKELQALAL
RAFQAVGASGWGRIDAMQDEQGKFWLLEVNTVPGMTSHSLVPKAAAAIGYSFDTLCVAIL
EQTLNGAAY
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaatgcttcaaaattcggaaaagttgccgtattgctgggtggtaaatctgcagag
cgtgaggtttcgctagatagtggaaccgccgtacttgaggcattagtgcgttctgggatc
aatgcagaagcgtttgatccacaagagcgtagtgttaccgagctggtaaattatgatcgt
gcgtttgtggtattgcatggccgtggcggtgaagacggccagattcagggcgcgctggaa
tggttgaatattccatataccggtacaggcgtacagggttctgccattggtatggataaa
gtcaaaaccaaacaggtttggcagggttcagaattacctactgcgccataccggatcgtg
accaaaaactcgaatgctcaagaaattgtatctgctctagatttgccgctgatcattaag
cctgtacacgaaggctcaagtattggcatgagtaaagttgaaaaagtagaagactttgcc
gatgcgattgccaaagcgactgaacatgatgccgtggttatggcagagaaatggatcaca
ggccgtgaatttaccattgtgattctgaatggtcaggctttacctgtcattcgtctgcaa
ccgccagaagatgtggctttctatgactatgaagctaaatatcagcgtaatgatgtggaa
tatggcattccatgtggcttgagcgaatctgaagagaaagaattgcaagccttggcccta
cgtgctttccaggcagtgggtgcaagtggttggggccgtattgatgcaatgcaggatgag
cagggcaagttctggttactggaagtgaatacagttccgggtatgaccagtcactctctg
gtaccaaaagcggctgcagcaattggctatagttttgatacgctctgtgtagcgattctg
gaacaaacattaaacggtgcggcatactaa
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