Actinomyces viscosus: NCTC10951_00301
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Entry
NCTC10951_00301 CDS
T06789
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
KO
K03530
DNA-binding protein HU-beta
Organism
avc
Actinomyces viscosus
Brite
KEGG Orthology (KO) [BR:
avc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avc03032
]
NCTC10951_00301 (hup)
03036 Chromosome and associated proteins [BR:
avc03036
]
NCTC10951_00301 (hup)
03400 DNA repair and recombination proteins [BR:
avc03400
]
NCTC10951_00301 (hup)
DNA replication proteins [BR:
avc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC10951_00301 (hup)
Chromosome and associated proteins [BR:
avc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC10951_00301 (hup)
DNA repair and recombination proteins [BR:
avc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC10951_00301 (hup)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DSBA
HU-DNA_bdg
DUF7342
DUF2267
Motif
Other DBs
NCBI-ProteinID:
VEI14442
UniProt:
A0A448PHS1
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All DBs
Position
1:323746..324027
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AA seq
93 aa
AA seq
DB search
MSVNRTELIAAIAEKAGLTKTDADAFLGAFQDVLVENVAKGEAVKITGLMGIERVERAAR
TGRNPRTGEEIQIPAGYGVKVTVGSSLKKAVAE
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaccgcaccgagctcatcgccgccatcgccgagaaggccggcctgaccaag
accgacgccgacgccttcctgggagccttccaggatgtcctcgttgagaacgtcgccaag
ggtgaggccgtgaagatcaccggcctcatgggtatcgagcgcgtcgagcgtgccgcacgt
actggccgtaacccccgcaccggtgaggagatccagatccccgccggctacggcgtcaag
gtcaccgtgggctcctcgctgaagaaggctgtcgccgagtga
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