Actinomyces viscosus: NCTC10951_00557
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Entry
NCTC10951_00557 CDS
T06789
Symbol
polC_1
Name
(GenBank) DNA polymerase III polC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
avc
Actinomyces viscosus
Pathway
avc03030
DNA replication
avc03430
Mismatch repair
avc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10951_00557 (polC_1)
03430 Mismatch repair
NCTC10951_00557 (polC_1)
03440 Homologous recombination
NCTC10951_00557 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avc03032
]
NCTC10951_00557 (polC_1)
03400 DNA repair and recombination proteins [BR:
avc03400
]
NCTC10951_00557 (polC_1)
Enzymes [BR:
avc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10951_00557 (polC_1)
DNA replication proteins [BR:
avc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10951_00557 (polC_1)
DNA repair and recombination proteins [BR:
avc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10951_00557 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
VEI14687
UniProt:
A0A3S4Z0B6
LinkDB
All DBs
Position
1:complement(602084..603742)
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AA seq
552 aa
AA seq
DB search
MSTVGTQVSFADMGTPLEGATFVVVDLETTGGAPGVRALTEIGAVKVRGGRVLAEFSTLV
NPGVAIPAQITMLTGITNAMVTGAPGVRVCVEAFLSWADLAADDVVLVAHNARFDVGHLR
GAASALDLEWPGPRVLDTLALARKAWTRSEVPNHKLGTLAAFVGSETRPTHRALDDARAT
VDVLHAALEVMAPLGVTHLEDLATACDPVPARRRAKSRLADALPTTPGVYQFRSAADQVL
YVGSAADLRRRVRSYFTAAEKRRKVAQMLDTTVSVRHIATPTLIEARVRELRMIAELDPP
VNRRSRAPRRQPWLHLATGPGPNAEPRLALTTVLPTAEVDRAVGPFASRSRGQEALRAAE
LVLRLRRWDGHDLRRVRRDDAPAEPEEALACLSGEVDRVAAPLLERIASLSQAERYEEAG
TWTSRLRCLLRGVARAERVRPLLACPHLMAARRREGGGWELVVVRWGMLAGSMTTAPGAD
PRPAVELLRAGSRVVDEPERVGELASIEETSLLADWVLDAGARIVEVDGDPSLLSWPAGS
AARHRKVLASEE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgtcgggacccaggtgtccttcgccgacatgggcacgcccctggagggggcg
accttcgtcgtcgtggacctggagaccaccggcggggcgccgggcgtccgcgcactcacc
gagatcggggcggtcaaggtgcgcggcgggcgagtgctggccgagttctccaccctggtc
aatcccggcgtggcgatcccggcccagatcacgatgctcacgggcatcaccaacgcgatg
gtgaccggagcgcccggcgtgcgcgtctgcgtggaggccttcctgtcctgggcggacctg
gcggccgacgacgtcgtcctggtggcgcacaacgcccgcttcgacgtcgggcacctgcgc
ggtgcggcgtcggccctggacctggagtggcccggaccccgggtactggacacgctggcg
ctggcccgtaaggcctggacgcgcagcgaggtgcccaaccacaagctgggaacactggcg
gccttcgtgggatccgagacccgccccacgcaccgggccctcgatgacgcgcgcgccacc
gtggacgtgctgcacgcggccctggaggttatggcgccgctgggcgtcacgcacctggag
gacctggccacggcctgcgatccggtgccggcacgtcggcgtgccaagagccggctcgcc
gacgccctgcccacgactcccggcgtctaccagttccgctcggcggcggaccaggtgctc
tacgtgggcagcgccgccgacctcaggcgccgcgtgcgctcctacttcaccgcggccgag
aagcgccgcaaagtagcacagatgctggacacgacggtgagcgtgcgccatatcgccacc
cccacactcattgaggcgcgggtgcgtgagctgcggatgatcgccgagctcgacccgccg
gtcaaccgccgctcacgggcaccgcgccgccagccctggctccacctggcgacgggcccg
ggtccgaacgccgagccccggctggcgctgacgaccgtgctgcccactgcggaggtcgac
cgcgcggtcggccccttcgcctcgcgcagccgggggcaggaggccctgcgcgccgccgag
ttggtgctgcgcctgcgtcgctgggacggccacgacctgcgccgggtccgtcgcgacgac
gccccggcggagcccgaggaggcactggcctgcctgtcgggcgaggtcgatcgggtggcc
gctcccctgctggaacggatcgcctccctgtcgcaggccgagcgctatgaggaggccggg
acctggacgagccgtctgcgctgcctgctgcgcggggtggcgcgcgccgagcgagtccgt
cctctgctggcctgtcctcatctcatggcggcccgacggcgtgagggcggcggctgggag
ctggtggtggtgcgctggggcatgctggccggttccatgacgaccgccccgggcgcagac
ccgcgtcccgccgtcgagctgctgcgcgccggctcgcgggtcgtcgatgagcccgagcgc
gtcggtgagctggcgagcatcgaggagacgagtctgctggccgactgggtcctggacgcc
ggcgcccgcatcgtggaggtcgacggcgacccctcgctcctgtcctggccagccggctcg
gctgcccgccaccgcaaggtcctcgcctccgaggagtga
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