Actinomyces viscosus: NCTC10951_01069
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Entry
NCTC10951_01069 CDS
T06789
Symbol
dnaE_2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
avc
Actinomyces viscosus
Pathway
avc03030
DNA replication
avc03430
Mismatch repair
avc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10951_01069 (dnaE_2)
03430 Mismatch repair
NCTC10951_01069 (dnaE_2)
03440 Homologous recombination
NCTC10951_01069 (dnaE_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avc03032
]
NCTC10951_01069 (dnaE_2)
03400 DNA repair and recombination proteins [BR:
avc03400
]
NCTC10951_01069 (dnaE_2)
Enzymes [BR:
avc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10951_01069 (dnaE_2)
DNA replication proteins [BR:
avc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10951_01069 (dnaE_2)
DNA repair and recombination proteins [BR:
avc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10951_01069 (dnaE_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
MCM10_OB
DUF655
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
VEI15259
UniProt:
A0A448PJU4
LinkDB
All DBs
Position
1:complement(1200704..1204297)
Genome browser
AA seq
1197 aa
AA seq
DB search
MAQMSSQEDAAPRDDFVHLHVHTDYSMLDGAGKIKDYVAEAKRLGQPALAITDHGYMFGA
YEFYSVAKAAGIKPIIGVEAYMTPGTSRFDKTRIFWGDESQRSDDVSARGSYTHMTLLSR
NDEGLHNLMRMDSFASLEGQWGKAPRIDRELLSRYGSGLIGTTGCPSSEVQTRLRLGQWD
EALRAAGELQDIFGKEFFYVELMDHGLEIEQRVTKDLLRLAQQIGAPLLATNDSHYVRPE
DRTIQDAMLCINSGSVLSDPDRFKFDGDTYYLRPGAEMRRLFSEMPQACDNTLLVAEQCD
VRFRTVDEGASFMPAFPVPEGETDESWFVKECWRGMDRRFNGDIPEDCRKQAEYEISVIT
QMGFPGYFLVVADYINWAKAHGIRVGPGRGSGAGSMVAYAMGITELNPLRHGLIFERFLN
PERISMPDIDVDFDERRRDEVIEYVREKYGADRISQVVTYGVIKAKQSLKDSSRVMGYPY
AVGDRLTKAMPPSVQGKDISIKGIFNPDDERYGEAEEFRKLHAEDPDAQKIVELAKGLEG
MTRQWGVHACAVIMSSATLTDIIPMMQRLQDGAVITQFDYPTCEHLGLLKMDFLGLRNLT
VISDALDNIVANGKPALDIDHVELDDRATYELLSRGETLGVFQLDGGGMRTLLRLMKPDN
FEDISAVGALYRPGPMGAESHTNYALRKNGLQEVVPIHPELKEALEPILGTTHGLIVYQE
QVMKIATDLAGFSMGKADALRKAMGKKKMDILAKMFVEFEAGMVEAGFSKESVKTLWDVV
VPFAKYAFNKAHSAAYGVVSYWTAYLKAHYPTEYMAALLTSQKDNKDKLAVYLGECRHMG
ITVLPPDVNASRAQFSAVDEDVRFGLSAVRNVGINVVDAIVAARQEKGEFTSFEDFLDKV
PAVVCNKRTIDSLIKAGAFDSLGHTRRSLQACHEDFVDEVIGVKRNEAAGQFDLFASLMG
GSDGEDASPFGNGPVFSSDVPNLPEWDKKDKLAYERDMLGLYVSDHPLMGLEGLLGKLAD
KEISELHENDELPDGAMVTIAGLITSLTRKTTKQGNLWAIAQIEDLAGSIEVLFFPQTYQ
TVSTMLAPDTVVTVRGRLNRRDGQVALYAQEMTIPDISSAAHEAVLITLPTNRCTGPLVE
QFKDVLTKHPGGSTVRLTLTSPGREVRTQLDASLRVEASPAFYSDIKALLGPGCLRH
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatgagcagtcaggaagatgcagcccccagggacgacttcgtccacctccac
gtccacaccgactactccatgctggacggcgccggaaagatcaaggactacgtggcggag
gccaagcgcctgggccagcccgccctggcgatcaccgaccacggctacatgttcggcgcc
tacgagttctactccgtcgccaaggccgccggcatcaagccgatcatcggggtggaggcc
tacatgacccccggcacctcccgcttcgacaagacccgaatcttctggggcgatgagtcc
cagagaagcgacgacgtctccgcccggggctcctacacgcacatgacgctgctgtcgcgc
aatgacgagggcctgcacaacctcatgcgcatggactccttcgcctccctggagggccag
tggggcaaggccccccgcatcgaccgcgagctgctctcccgctacgggtccggcctcatc
ggaaccaccggctgcccgtcctcggaggtccagacccgcctgcgcctgggccagtgggac
gaggccctgcgcgccgccggggagcttcaggacatcttcggcaaggagttcttctacgtc
gagctcatggaccacggcctggagatcgagcaacgcgtcaccaaggacctgctgcgcctg
gcccagcagatcggagccccgctgctggccaccaacgactcccactacgtgcgccccgag
gaccgcaccatccaggacgcgatgctgtgcatcaactccggatcggtgctctccgacccc
gaccgcttcaagttcgacggtgacacctactacctgcgccccggtgccgagatgcgccgc
ctcttctcggagatgccccaggcctgcgacaacaccctgctcgtggccgagcagtgcgac
gtgcgcttccgcaccgtggacgagggggcctccttcatgccggccttccccgtgcccgag
ggcgagaccgacgagtcctggttcgtcaaggagtgctggcgcggcatggaccgccgcttc
aacggcgacatccccgaggactgccgcaagcaggccgagtacgagatcagcgtcatcacc
cagatgggcttccccggctacttcctcgtcgtggccgactacatcaactgggctaaggcc
cacggcatccgggtggggccgggacgcgggtcgggagccgggtcgatggtggcctacgcg
atgggtatcaccgagctcaacccgctgcgccacgggctcatcttcgagcgcttcctcaac
cccgagcgcatctccatgcccgatatcgacgtcgacttcgacgagcgccggcgcgacgag
gtcatcgagtacgtgcgcgagaagtacggtgccgaccgcatcagccaggtcgtcacctac
ggcgtcatcaaggccaagcagtccctgaaggactccagccgtgtcatgggctacccctat
gcggtcggtgaccgcctcaccaaggccatgcccccctcggtccagggcaaggacatctcc
atcaagggcatcttcaaccccgacgacgagcgctacggggaggccgaggagttccgcaag
ctgcacgccgaggaccccgacgcccagaagatcgtcgagctggccaaggggctggagggc
atgacccgccagtggggcgtccacgcctgcgccgtcatcatgtcctcggccacgctcacc
gacatcatccccatgatgcagcgcctccaggacggcgccgtcatcacccagttcgactac
cccacctgcgagcacctgggcctgctcaagatggacttcctgggactgcgcaacctcacg
gtcatctccgacgccctggacaacatcgtcgccaacggcaagcccgccctggacatcgac
cacgtcgagctcgatgaccgcgccacctacgagctcctctcacgtggcgagaccctgggc
gtcttccagctcgacggcggcggcatgcgcaccctgctgcgcctgatgaagccggacaac
ttcgaggacatctccgccgtcggcgccctctaccggcccggccccatgggggcggagtcg
cacaccaactacgcgctgcgcaagaacggcctgcaggaggtcgtcccgatccaccccgag
ctcaaggaggccctcgaaccgatcctgggaaccacgcacggcctcatcgtgtaccaggag
caggtcatgaagatcgccaccgacctggcgggcttctccatgggcaaggccgacgcgctg
cgcaaggccatgggcaagaagaagatggacatcctggccaagatgttcgtcgagttcgag
gccggcatggtcgaggccgggttctccaaggagagcgtcaagaccctgtgggacgtcgtg
gtgcccttcgccaagtacgccttcaacaaggcccactcggccgcctacggggtcgtgtcc
tactggaccgcctacctcaaggcgcactaccccaccgagtacatggcggccctgctcacc
agtcagaaggacaacaaggacaagctggcggtctacctgggggagtgccgccacatgggc
atcaccgtgctgcccccggacgtcaacgcctcgcgggcccagttctccgcggtcgacgag
gacgtgcgcttcggactgtccgcggtgcgcaacgtcggcatcaacgtcgtcgacgcgatc
gtggccgctcgccaggagaagggggagttcacctccttcgaggacttcctcgacaaggtg
cccgccgtcgtgtgcaacaagcgcaccatcgactccctcatcaaggccggcgccttcgac
tcgctggggcacacgcggcgctccttgcaggcctgccacgaggacttcgtcgacgaggtc
atcggcgtcaagcgcaatgaggccgccggccagttcgacctgttcgcgtctctcatgggc
ggctccgacggcgaggacgcctcccccttcggcaacggcccggtcttctcctccgacgtc
cccaacctgccggagtgggacaagaaggacaagctggcctacgagcgcgacatgctggga
ctctacgtctccgaccaccccctcatgggcctggagggcctgctcggaaagctcgccgac
aaggagatctccgagctccacgagaatgatgagctgcccgacggcgccatggtgaccatc
gccggcctcatcacgtcgctgacccgcaagaccaccaagcagggcaacctgtgggccatc
gcccagatcgaggacctggccggcagtatcgaggtgctcttcttcccccagacgtatcag
accgtctccaccatgctggctccggacacggtggtcacggtgcgcggacgcctcaaccgg
cgtgacggccaggtcgccctgtacgcccaggagatgacgattccggacatctccagcgcc
gctcatgaggcggttctcatcacgctgcccaccaaccggtgcaccgggccgctggtcgag
cagttcaaggacgtgctcaccaagcacccgggagggtccacggtgcgtctgacgctgacc
agccctgggcgcgaggtgcgcacccagctggacgcctcgctgagggtggaggcctcgccg
gccttctactccgacatcaaggcgctgctgggcccggggtgcctgcgccactga
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