Actinomyces viscosus: NCTC10951_01112
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Entry
NCTC10951_01112 CDS
T06789
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
avc
Actinomyces viscosus
Brite
KEGG Orthology (KO) [BR:
avc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avc03016
]
NCTC10951_01112 (truB)
Enzymes [BR:
avc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC10951_01112 (truB)
Transfer RNA biogenesis [BR:
avc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10951_01112 (truB)
Prokaryotic type
NCTC10951_01112 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
VEI15345
UniProt:
A0A448PK22
LinkDB
All DBs
Position
1:complement(1255992..1257140)
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AA seq
382 aa
AA seq
DB search
MPQPSDLSEPAGQADGRSGHGGDQHRARRRRPDVARGAVAASDGVLLVDKPQGLTSHDVV
GAARRLAATRKVGHAGTLDPMATGLLVLGIGRATRFLTYLVGADKTYEATIRLGIETTTE
DAEGELVSAHGCRADDLPADRLQEALAGLTGLIQQVPSAVSAVKVDGVRAYKRVRDGQEV
ELEARPVTVHELRITGEPRQMSAGVVAPPSADLTNVVGMVDVVDLDVVVSCSSGTYVRAL
ARDLGRALGCGAHLTALRRTGVGPFDICEASTLTALSEQVQDDAASTRPRGLTTIPLEEV
ARRCFERLSLTEAEARGLRFGQPLDVTALERAQAPAGDSPPVTSKEAQGRRVVAGFAPEG
RLVALLTPQGSRARPVLVLDPA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcagccctctgatctctccgagcccgccgggcaggcagacggtcgcagtggtcac
ggaggcgatcagcaccgagcgcgtcggcgccgccccgacgtcgcccgtggcgccgtggcc
gcctccgacggggtcctcctggtggacaagccccaggggctgaccagccacgacgtcgtc
ggcgccgcccggcgcctggccgccacccgcaaggtgggccatgccggcaccctcgacccc
atggccaccggcctgctggtcctgggcatcggacgcgccacccgcttcctcacctacctg
gtgggggcggacaagacctacgaggcgaccatccgcctcgggatcgagaccaccaccgag
gacgccgagggcgagctcgtctccgctcacggctgccgcgccgacgacctgcccgcggat
cgtctccaggaggcgctggcgggcctgaccggtctgatccagcaggtgcccagtgctgtc
tcagccgtcaaggtcgacggcgtacgcgcctacaagcgggtccgtgacggccaggaggtc
gagctggaggccaggcccgtcaccgtccacgagctgcgcatcaccggcgagccacgccag
atgagcgctggcgtcgtcgctccgccgtcagccgacctgaccaacgtggtcggcatggtc
gacgtggttgatctcgacgtcgtcgtctcctgctcctcgggaacctacgtgcgggccctg
gccagggacctgggccgggcactgggatgcggggcgcacctgaccgcgctgcggcgcacc
ggcgtcggccccttcgacatctgcgaggccagcaccctgacggccctgtccgagcaggtg
caggacgacgccgcctctacccgcccccgcggcctgaccacgatcccgctggaggaggtc
gcccggcgctgcttcgagcgtctgtctctcacggaggccgaggcgcgcgggctgcgcttc
gggcagcctctcgacgtcacggccctggaacgggcccaggcacccgcgggtgactcgcct
ccggtgacgtccaaggaggctcaggggcggcgcgtagttgccggattcgcgcccgagggg
cggctcgtggcactgttgacgcctcaaggctcgcgcgcccgcccggtcctggtcctggac
ccagcttga
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