Actinomyces viscosus: NCTC10951_01940
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Entry
NCTC10951_01940 CDS
T06789
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
avc
Actinomyces viscosus
Brite
KEGG Orthology (KO) [BR:
avc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avc03032
]
NCTC10951_01940 (topA)
03400 DNA repair and recombination proteins [BR:
avc03400
]
NCTC10951_01940 (topA)
Enzymes [BR:
avc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC10951_01940 (topA)
DNA replication proteins [BR:
avc03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10951_01940 (topA)
DNA repair and recombination proteins [BR:
avc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10951_01940 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
HC2
Motif
Other DBs
NCBI-ProteinID:
VEI16944
UniProt:
A0A448PM65
LinkDB
All DBs
Position
1:complement(2261691..2264612)
Genome browser
AA seq
973 aa
AA seq
DB search
MSTKLVIVESPNKVRSIAGYLGPEFDVEASVGHIRDLPQPSELPATMKKGPYGKFAVDVE
DDFTPYYVVNPDKKKTVAQLKKALKEADELYLATDDDREGEAIAWHLQQVLKPKVPVRRM
VFTEITREAVTRALDNTRDLDIHLVDAQETRRILDRLVGYEVSPVLWRKVRAGLSAGRVQ
SVATRLVVERERERMAFRSASYWGVEATFSTVLSPVDVTARQDASFTARLVTLDGRRVAT
GRDFNDAGEPRPAAVKASAVHLHQVGATAVAEAIGRGEPRVAGVEDKPYKRRPAAPFTTS
TLQQEASRKLRMNPRETMRVAQGLYENGFITYMRTDSTVLSAQAVSAARSQVAELYGAEY
VPERPRVYASKSKGAQEAHEAIRPAGDHFRTPAQVSGELTGAQFRLYELIWKRTVASQMA
DAVGSTATVTVEVPLTPVAGESRDSGPTFSTAGLTASGTVITFRGFLAAYEEGRDAERYQ
DDSGAAGKDAKDVRLPAMITGQELAALAAEASGHETTPPPRYTEASLVKALEEREIGRPS
TYAATMSTISDRGYVDHRGQALVPTWLAFAVTRLLEENFTELVDYDFTASMERDLDRIAA
GDEDRVAWLRRFYNGQGASEAVAKEIAEAAASGELDVAAASAAELRAQGLKGLVDNLGEI
DARAVNSIEIGEGITLRVGRYGPYLEDAEGKRANVPADVAPDELTVDKARELFARAADDG
RELGVDPVSGHVIIAKDGRYGPYVTEVLPDPEETAETAEGETGEKVATTAKSAKTKKTTT
RKTAKAAKPKPRTASLLRSMDLSTVTLEQALDLLSLPRVVGQDPESGADITAQNGRYGPY
LKKGTDSRSLETEEQIFTVTLEQALEIFAQPKRRRGQAAARGPLRELGEDPATGKPVVIK
DGRFGPYFTDGETNVTLRRGDDPATVTPERAFELLAEKRAKKPAKKRTTRKTTAKKTTTK
KTATKKAAAKKEA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccaagctcgtcatcgtggagtcccccaacaaggtgcgctccatcgccggctac
ctcggtccggagttcgacgtcgaggcctccgtggggcacatccgcgacctgccgcagccc
tccgagctgcccgccaccatgaagaaggggccctacgggaagttcgcggtcgacgtcgag
gacgacttcacgccctactacgtcgtcaaccctgacaagaagaagacggtcgcccagctc
aagaaggccctcaaggaggccgacgagctctacctggccactgacgacgaccgcgagggc
gaggccatcgcctggcacctccagcaggtcctcaagcccaaggtgccggtgcgccgcatg
gtcttcaccgagatcacccgcgaggccgtcacccgggccctggacaacacccgcgacctg
gacattcacctcgtcgacgcccaggagacccgccgcatcctggaccgcctcgtgggctac
gaggtcagcccggtcctgtggcgcaaggtccgcgccggcctgtccgccgggcgcgtccag
tcggtggccacccgcctcgtcgtcgagcgcgagcgcgagcgcatggccttccgctcggcc
tcctactggggggtggaggccaccttctccaccgtcctgtccccggtggacgtcacggcc
cgccaggacgcctccttcaccgcccgcctggtcaccctcgacgggcggcgcgtggccacc
ggccgcgacttcaacgacgccggcgagccgcgcccggccgcggtcaaggcctccgccgtc
cacctccaccaggtgggggccaccgccgtcgccgaggccatcggccggggcgagccgcgt
gtggccggcgtcgaggacaagccctacaagcgccgcccggcggcccccttcaccacctcc
accctccagcaggaggcctcccgcaagctgcgcatgaacccgcgcgagaccatgcgcgtg
gcgcagggcctctacgagaacggcttcatcacctacatgcgtaccgactccacggtcctg
tccgcccaggccgtgtccgcggcccgctcgcaggtggccgagctctacggggccgagtac
gtccccgagcgcccccgcgtctacgcctccaagtccaagggcgcccaggaggcccacgag
gcgatccgccccgccggcgaccacttccgcaccccggcccaggtctccggcgagctgaca
ggagcccagttccgcctctacgagctcatctggaagcggacggtggcctcccagatggcc
gacgccgtcggctcgaccgccaccgtgaccgtcgaggtgccgctgactccggtggccggt
gagtcgcgcgactccggtcccaccttctccacggccggcctgacggcgtcgggcaccgtc
atcaccttccgcggcttcctggccgcctatgaggagggccgcgacgccgagcgctaccag
gacgactccggcgccgccggtaaggacgccaaggacgtgcgcctgcccgcgatgatcacc
ggccaggagctggccgccctggccgccgaggcctcgggccacgagacgacgccgccgccg
cgctacaccgaggcctccctggtcaaggccctcgaggagcgcgagatcggtcgcccctcg
acctacgcggccaccatgtccacgatctccgaccgcggctacgtcgaccaccgcggccag
gccctggtgccgacgtggctcgccttcgccgtcacccgcctgctggaggagaacttcacc
gagctcgtcgactacgacttcaccgcctccatggagcgcgacctggaccggatcgccgcc
ggcgatgaggaccgggtggcctggctgcggcgcttctacaacgggcagggcgcctccgag
gccgtcgccaaggagatcgccgaggccgcggcctccggtgagctcgacgtggccgccgcc
tccgccgccgagctgcgggcccagggcctcaagggcctggtggacaacctcggcgagatc
gacgcccgcgccgtcaactccatcgagatcggcgagggcatcaccctgcgggtcgggcgc
tacggcccctacctggaggatgccgagggcaagcgcgccaacgtgccggctgacgtcgcc
cccgacgagctgaccgtggacaaggcccgcgagctcttcgcccgcgccgccgacgacggc
cgcgagctcggcgtcgacccggtcagcgggcacgtcatcatcgccaaggacggccgctac
ggcccctacgtcaccgaggtcctgcccgaccccgaggagacggccgaaaccgccgagggg
gagaccggcgagaaggttgctacgaccgcgaagtccgcgaagacgaagaagacgaccacg
aggaagaccgccaaggccgccaagcccaagccccgcacggccagcctcctgcgctccatg
gacttgtccacggtgaccctggagcaggccctggacctgctcagtctgccgcgcgtcgtc
gggcaggacccggagtcgggtgcggacatcaccgctcagaacggccgctacgggccctac
ctcaagaagggcacggactcgcgctccctggagaccgaggagcagatcttcaccgtcacc
ctggagcaggccctggagatcttcgcccagcccaagcggcgtcgggggcaggcggcggcc
cgcgggccgctgcgcgagctcggcgaggacccggccaccggcaagcccgtggtcatcaag
gacggccgcttcggcccctacttcaccgatggggagaccaacgtgaccctgcgccgcggc
gacgacccggccaccgtcacccccgagcgcgccttcgagctgctcgcggagaagcgcgcc
aaaaagccggccaagaagcgcaccacccgcaagaccaccgccaagaagacgactaccaag
aagacggccaccaagaaggctgctgcgaagaaggaggcctag
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