Actinomyces viscosus: NCTC10951_02568
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Entry
NCTC10951_02568 CDS
T06789
Name
(GenBank) Hef nuclease
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
avc
Actinomyces viscosus
Pathway
avc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
avc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCTC10951_02568
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10951_02568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avc03021
]
NCTC10951_02568
03400 DNA repair and recombination proteins [BR:
avc03400
]
NCTC10951_02568
Enzymes [BR:
avc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10951_02568
Transcription machinery [BR:
avc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCTC10951_02568
DNA repair and recombination proteins [BR:
avc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCTC10951_02568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEI18173
UniProt:
A0A448PP16
LinkDB
All DBs
Position
1:complement(3007233..3008915)
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AA seq
560 aa
AA seq
DB search
MSATPSDSASPASSAPDGPLIVQSDKSVLLEVAHPGAAEARRAIAAFAELERAPEHIHTY
RITPLALWNARAAGLDAETVVHVLITYSRFPVPHALLTEIAETMGRYGRLQLITDPAHGL
VLHATDVPVLEEVMRSKRTKGLLGTRLGDADVVVHPSERGHLKQVLIKLGWPAEDLAGYV
DGEAHPITLTDSPDTFQLRPYQGEAVESFWAGGSGVVVLPCGAGKTLVGAASMAKSSTTT
LILVTNAVSARQWKEELIRFTTLTEEEIGEYSGSRKEVRPVTIATYQVLTTKRKGVYPHL
DLLDSHDWGLIVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKR
YDAPWKDLENQGWIAPAICTEVRLTLDAGERMAYATAEPEERYRLAASSPRKLPIIDALL
ARHEGESALVIGQYVDQLTEIAEHLDAPVITGSTTVRERQRLYDAFRSGEIRTLVVSKVA
NFSIDLPGASVAVQVSGSFGSRQEEAQRLGRIVRPKEDGRQAHFYTVVARDTADQEYAAH
RQRFLAEQGYAYAITDAEDL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacgcccagcgattctgcgtcaccggcgtcgtcggcccccgacggccccctc
atcgtccagtccgacaagtccgtcctcctggaggtcgcccaccccggggccgccgaggcc
cgccgcgccatcgccgccttcgccgagctggagcgggcccccgagcacatccacacctac
cggatcaccccgctggccctgtggaacgcgcgcgccgcgggcctggacgcggagacggtc
gtccacgtcctcatcacctactcgcgcttcccggtgccgcacgccctgctcaccgagatc
gccgagacgatgggccgttacggccgcctccagctcatcaccgaccccgcccacggcctg
gtcctgcacgccaccgacgtgccggtcctggaggaggtcatgcgctccaagcgcaccaag
ggcctgctggggacccggctgggggacgccgacgtcgtcgtgcatccctccgagcggggc
cacctcaagcaggtgctcatcaagctgggctggccggccgaggacctggccggttacgtc
gacggcgaggcccaccccatcaccctgaccgactcccccgacaccttccagctgcgcccc
taccagggcgaggcggtggagagcttctgggcgggagggagcggcgtcgtcgtcctgccc
tgcggggccggcaagaccctcgtgggcgccgcctccatggccaagagctcgacgacgacc
ctcatcctggtcaccaacgcggtctcggcgcgtcagtggaaggaggagctcatccgcttc
accaccctgaccgaggaggagatcggcgagtactccggctcgcgcaaggaggtccgcccc
gtcacgatcgccacctaccaggtcctgaccaccaagcggaagggcgtctacccgcacctg
gacctgctggactcccacgactgggggctcatcgtctacgacgaggtccacctcctgccc
gccccaatcttccggatgaccgcggacctgcaggcgcgccgccgcctgggcctgaccgcg
accctcgtgcgcgaggacggccgcgaggacgaggtcttcagcctcatcggccccaagcgc
tacgacgccccctggaaggacctggagaaccagggctggatcgccccggcgatctgcacc
gaggtgcgcctgaccctcgacgccggcgagcgcatggcctacgcgaccgccgagcccgag
gagcgctaccgcctggccgcctcctccccgcgcaagctgccgatcatcgacgccctcctg
gcccgccacgagggcgagtcggccctggtcatcggccagtacgtggaccagctcaccgag
atcgccgagcacctggacgccccggtcatcaccggctcgacgacggtgcgcgagcgccag
cgcctctacgacgccttccgctccggtgagatccgcacgctcgtggtctccaaggtcgcc
aacttctccatcgacctgcccggggcgagcgtcgccgtccaggtctcgggctccttcggc
tcgcgccaggaggaggcccagaggctcggccggatcgtgcggcccaaggaggacggccgt
caggctcacttctacacggtggtcgcccgcgacaccgccgaccaggagtacgcggcgcac
cggcagcgcttcctggccgagcagggctacgcctacgccatcaccgacgccgaggacctc
tga
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