Azotobacter vinelandii CA6: AvCA6_00200
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Entry
AvCA6_00200 CDS
T02634
Symbol
yrdC
Name
(GenBank) RNA binding yrdC protein
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
avd
Azotobacter vinelandii CA6
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avd03009
]
AvCA6_00200 (yrdC)
03016 Transfer RNA biogenesis [BR:
avd03016
]
AvCA6_00200 (yrdC)
Enzymes [BR:
avd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
AvCA6_00200 (yrdC)
Ribosome biogenesis [BR:
avd03009
]
Prokaryotic type
Other maturation factors
AvCA6_00200 (yrdC)
Transfer RNA biogenesis [BR:
avd03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AvCA6_00200 (yrdC)
Prokaryotic type
AvCA6_00200 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Amanitin
Motif
Other DBs
NCBI-ProteinID:
AGK18996
UniProt:
M9YAZ4
LinkDB
All DBs
Position
22722..23279
Genome browser
AA seq
185 aa
AA seq
DB search
MLGDWRVRQVARAVRRGGVIAYPTEAVWGLGCDPWNADAVRRLLALKRRPQDKGLILVAA
DIGQFGFLLDDLPSAWRERLAGTWPGPNTWLVPHRGRLPAWITGRHASVALRVSDHPLVR
ALCRLTGPLVSTSANPAGRPAARSRLRVEQYFPRRLDAVLGGALGGRRNPSLIRDLASGQ
VIRPA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgattggcgggtgcgacaggtggcgcgggcggtgcgccggggcggggtgatc
gcttatccgaccgaggcggtctggggcctgggctgcgatccgtggaacgcggatgcggtg
cgccgcctgctggcgctcaagcggcggccgcaggacaagggcctgatcctggtcgccgcc
gacattggccagttcggcttcctgctcgacgacctgccgtcggcctggcgcgagcggctg
gccgggacctggccggggccgaacacctggctggtgccgcaccggggccgcctgccggca
tggatcaccggccgccacgcgagcgtcgccctgcgcgtcagcgaccatccgctggtgcgt
gcgctgtgccgtctcaccggcccgctggtgtccacctcggccaatcccgccggccgcccc
gccgcacgctcgcggctgcgcgtcgaacagtacttcccgcgccgcctggacgccgtgctc
ggcggcgccctgggcgggcggcgcaacccgagcctgatccgcgacctggccagcggccag
gtgatccgcccggcctag
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