Azotobacter vinelandii CA6: AvCA6_00520
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Entry
AvCA6_00520 CDS
T02634
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd03420
Nucleotide excision repair
avd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AvCA6_00520 (uvrD)
03430 Mismatch repair
AvCA6_00520 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avd03400
]
AvCA6_00520 (uvrD)
Enzymes [BR:
avd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AvCA6_00520 (uvrD)
DNA repair and recombination proteins [BR:
avd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AvCA6_00520 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AvCA6_00520 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
HTH_TIMELESS
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AGK18946
UniProt:
M9YAS9
LinkDB
All DBs
Position
complement(51366..53546)
Genome browser
AA seq
726 aa
AA seq
DB search
MREDLSFLLSALNAAQRQAVTAPLGPRLVLAGAGSGKTRVLVHRIAWLIEVENASPHAIL
AVTFTNKAAAEMRTRIEQLLGTSPMGMWIGTFHGLAHRLLRAHWQEAGLAENFQILDADD
QQRLVKRVIRELGLDEQRWPARQAQWFINAKKDEGLRPQHIQPGGDLFLATQAKIYAAYE
AACARAGVIDFAELLLRALDLWRDRPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGASLMAVGDDDQSIYGWRGARIENIQQFCQDFPAAETIRLEQNYRSTGSILKAANALIA
NNQGRLGKELWTEGADGEPIGLYAAFNEHDEARYVVDSIEQALKDGLTRSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAVAYLRLIHTRHNDAALERIINLPARGI
GEKTVETLRQLAREADLSLWGALHQAVGGKLVSGRAASALNAFVELIDSLALKVEQLPLP
QTIQVVVEDSGLRAYHGAEKGEKAQARVENLEELVSAARAFEHYEDEGLQTPLAAFLDHA
SLEAGEQQAGDFEDSVQLMTLHSAKGLEFPQVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMRRLVVSYAETRRLYGSETYNRISRFVREIPPALLREVRLSNGPGRPVAVRA
GQGSPLAGAAVPDSPFVLGQRVRHPLFGEGTILNFEGAGAQARVQVNFEDEGSKWLMLGY
AKLEAV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaagacctatcctttctgctaagtgcactcaacgccgcccagcgccaggccgtg
accgctcccctgggtccgcgcctggtgctggccggcgccggctcgggcaagacccgcgtg
ctggtgcatcgcatcgcctggctgatcgaggtggagaatgcttctccccatgcgatcctc
gccgtgactttcaccaacaaggccgccgccgaaatgcgcacgcgcatcgagcagttgctc
gggacgagcccgatgggcatgtggatcggcaccttccacggcctggcccaccgcctgctg
cgcgcccactggcaggaagcgggtctcgccgagaacttccagatcctcgacgccgacgac
cagcagcggctggtcaagcgggtgatccgcgaactgggtctcgacgagcagcgctggccg
gcgcgccaggcgcagtggttcatcaacgcgaagaaggacgagggcctgcgcccgcagcac
atccagccgggcggcgacctgttcctcgccacccaggcgaagatctacgcggcctacgag
gcggcctgcgcgcgcgccggggtgatcgacttcgccgagctgctgctgcgcgccctcgac
ctgtggcgcgaccggccgggcctgctggagcactaccagcggcgcttccggcatgtgctg
gtcgacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctcgcgcag
ggcggcgccagcctgatggcggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcgcggatcgagaacatccagcagttctgccaggactttccggccgccgaaaccatccgc
ctggagcagaactaccgctccaccggcagcatcctcaaggccgccaacgcgctgatcgcc
aacaaccagggccgcctcggcaaggagctgtggaccgagggcgccgacggcgagccgatc
ggcctctacgccgccttcaacgagcacgacgaggcgcgctacgtggtcgacagcatcgag
caggcgctcaaggacggcctgacacgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctcgaggaggcgctgctgcgggagaagatcccctaccgcatctacggc
ggccagcgcttcttcgaacgcgccgagatcaagaacgcggtggcctacctgcggctgatc
cacacccgccacaacgacgcggcactggagcggatcatcaacctgccggcccgcggcatc
ggcgagaagaccgtcgagaccctgcgccaactggcccgcgaggccgacctctcgctgtgg
ggcgcgctgcaccaggcggtcggcggcaagctggtttccggccgcgccgccagcgcgctg
aacgccttcgtcgaactgatcgacagcctggccctcaaggtcgagcaactgccgctgccg
cagacgatccaggtggtggtcgaggattccggactgcgcgcctaccacggcgcggaaaag
ggcgagaaggcccaggcgcgggtggaaaacctcgaggaactggtcagcgccgcccgcgcc
ttcgagcactacgaggacgagggcctgcagactccgctggcggccttcctcgaccacgcc
tcgctggaggccggcgaacagcaggccggcgacttcgaggacagcgtgcagttgatgacc
ctgcacagcgccaagggcctggagttcccgcaggtgttcctggtcggcatggaggagggc
ctgttcccccacaagatgagcctggaggaacccggccgcctggaggaggagcgccgcctg
gcctacgtcggcatcacccgcgccatgcggcgcctggtggtcagctatgccgagacccgc
cggctgtacggcagcgagacctacaacaggatctcgcgcttcgtccgcgagatcccgccg
gcgctgctgcgcgaggtgcgcctgtccaacggacccggccgccccgtcgccgtccgcgcc
ggccagggctcgccgctcgccggcgccgccgtgccggacagccccttcgttctcggccag
cgcgtgcgccatccgctgttcggcgaaggcaccatcctcaacttcgagggcgccggcgcc
caggcgcgggtgcaggtgaacttcgaggacgaaggcagcaagtggctgatgctcggctac
gccaagctggaagcggtctga
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