KEGG   Azotobacter vinelandii CA6: AvCA6_01100
Entry
AvCA6_01100       CDS       T02634                                 
Name
(GenBank) ECF sigma factor, FecI family
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
avd  Azotobacter vinelandii CA6
Pathway
avd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:avd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AvCA6_01100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:avd03021]
    AvCA6_01100
Transcription machinery [BR:avd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AvCA6_01100
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF HTH_23 Sigma70_r4 GerE HTH_11 HTH_VMAP-M9 HTH_38 HTH_28 HTH_Tnp_4 NirdL-like_HTH
Other DBs
NCBI-ProteinID: AGK19084
LinkDB
Position
112066..112596
AA seq 176 aa
MSTPDTSYPQQVADYYAEHHGWIRAWLHRKLGNACDAADLAHEVFLRLLARPRRFDSDGH
ARAYLHGMSHHVCVDFWRRRQVEQAWLEVLASRPETFAPSEEYRAIVLEALQQVHAMLSR
LPERVAEAFLLAQLQGLGYKAIGERLGVSERTVTKYMAQAMYQCLLLEAELDEALV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtcgacccccgatacttcctatccgcaacaggtagcggactactatgccgagcaccat
ggctggatacgcgcctggctgcaccggaaactgggcaacgcctgcgacgccgccgacctg
gcccacgaggtgttcctgcggttgctggctaggccgcgccggttcgacagcgacggccat
gcgcgcgcctatctgcacggtatgtcccatcatgtctgcgtggatttctggcggcgccgg
caggtcgagcaggcctggctggaggtcctggccagtcgtcccgaaaccttcgcgccttcg
gaagagtaccgggcaatagtgctggaggccctgcagcaggtgcacgcgatgctctcccgc
ctgccggagcgggtcgccgaggccttcctcctggcccagctccagggactgggctacaag
gccatcggcgaacgcctgggggtgtccgaacggaccgtgaccaagtacatggcccaggcg
atgtaccagtgcctgctgctcgaggccgaactcgatgaagccctcgtctga

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