Azotobacter vinelandii CA6: AvCA6_02780
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Entry
AvCA6_02780 CDS
T02634
Symbol
vnfA
Name
(GenBank) vanadium nitrogenase sigma54-dependent transcriptional activator, VnfA
KO
K02584
Nif-specific regulatory protein
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AvCA6_02780 (vnfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avd03000
]
AvCA6_02780 (vnfA)
Transcription factors [BR:
avd03000
]
Prokaryotic type
Helix-turn-helix
Other families
AvCA6_02780 (vnfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
GAF_3
bpMoxR
MCM
AAA_3
AAA_16
AAA_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGK18951
UniProt:
M9YAT6
LinkDB
All DBs
Position
complement(262210..263778)
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AA seq
522 aa
AA seq
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MSSLPQYCECGLGECRTDVLPLLYEMSQIATESGDLSSIISILLRLMKRHMKVVRGMVTL
YDRDSGSIVLHESFGLSPEEAGKGVYLLGEGIIGRVVETGQSIVVPCIRDEPAFLNRTGS
RDCDSDDANLSFICVPILRGRQVMGTISAERLYDNAELLKLDVEVLSILATTTAQAVELY
LVENVENVALEAENRRLRSALGERFKPANIIGNSKPMLEVYQLIERVVRTRTTVLILGES
GVGKELVAGAIHYNSPAAKGPFVKFNCASLPESVIESELFGHEKGSFTGAIGLRKGRFEE
AAGGTIFLDEVGEMSLTTQAKLLRVLQERSFERVGGNTTIHVDLRVIAATNRNLAEMVAD
GTFREDLYYRLNVFPITIPPLRERGSDIITLADHFVSRFSREMGIEVKRISTPALNMLQS
YQWPGNVRELENVIERAMLLSEDGVIHGYHLPPSLQAPVVGDSEAPPDGLEARLGAIEYE
LIVEALKLHHGNMTEAATHLGLTRRVLGLRMGKYNLNYKDYR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctcccccaatactgcgaatgcggcctcggcgagtgccgtacggacgtgttg
ccgctgctctacgaaatgagccagatcgccacggaaagcggcgatctgtcgagcatcatc
agcatcctgctgcgcctgatgaagcgccacatgaaagtggtgcgcggcatggtcaccctc
tacgaccgggactccggcagcatcgtcctgcacgagagcttcggcctcagccccgaagag
gccggcaagggcgtctatctgctcggcgaaggcatcatcgggcgggtggtggaaaccggc
cagagcatcgtggtgccctgcatccgcgacgagccggcgttcctcaaccgcaccggcagc
cgcgactgcgacagcgacgacgccaacctgtcgttcatctgcgtgccgatcctgcgcggt
cgccaggtgatgggcacgatcagcgccgagcgtctctacgacaacgccgaactgctcaag
ctggacgtcgaggtgctgtcgatcctggccaccaccaccgcccaggcggtcgaactgtac
ttggtggagaacgtcgagaacgtcgccctggaggcggagaaccgtcgcctgcgcagcgcc
ctgggggagcgcttcaagcccgccaacatcatcggcaattccaagccgatgctcgaggtc
tatcaactgatcgagcgcgtggtgcgtaccaggaccacggtgctgatcctcggcgagagc
ggcgtcggcaaggagctggtggccggcgccatccactacaacagcccggcggccaagggg
ccgttcgtcaagttcaactgcgcctcgctgcccgaatcggtcatcgagagcgagctgttc
ggccacgagaagggctccttcaccggcgccatcgggctgcgcaagggtcgcttcgaggaa
gccgccggcggcaccatcttcctcgacgaggtcggcgagatgtcgctgaccacccaggcc
aagctgctgcgcgtgctgcaggagcgcagcttcgagcgggtcggcggcaacaccaccatc
cacgtcgacctgcgggtgatcgccgcgaccaaccgcaacctcgccgagatggtcgccgac
ggcaccttccgcgaggacctctactaccgcctcaacgtcttccccatcaccatcccgcca
ctgcgcgagcgcggcagcgacatcatcaccctggccgaccacttcgtctcgcgcttctcc
agggaaatgggcatcgaggtcaagcgcatctccaccccggcgctgaacatgctgcagagc
taccagtggccgggcaacgtgcgcgaactggagaacgtcatcgaacgcgccatgctgctc
agcgaggacggggtgatccacggctaccatctgccgccgtcgctgcaggcgccggtggtc
ggcgacagcgaagcgccgccggacggcctagaggcgcgcctcggcgccatcgagtacgaa
ctcatcgtcgaagccctcaagctgcaccacggcaacatgaccgaggcggccacccacctc
ggcctgacccgccgcgtgctcggcctgcgcatgggcaagtacaacctcaactacaaggac
taccgctga
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