Azotobacter vinelandii CA6: AvCA6_08020
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Entry
AvCA6_08020 CDS
T02634
Name
(GenBank) Sigma54-dependent transcriptional activator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
avd
Azotobacter vinelandii CA6
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avd03000
]
AvCA6_08020
Transcription factors [BR:
avd03000
]
Prokaryotic type
Helix-turn-helix
Other families
AvCA6_08020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
PAS_4
PAS_9
AAA_2
AAA
HTH_30
HTH_50
HTH_23
PAS
HTH_7
Diguanyl_cycl_sensor
PAS_8
HTH_28
HVO_A0261_N
PAS_7
HTH_22
IclR_C
HTH_17
HTH_32
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGK19525
UniProt:
M9YFH1
LinkDB
All DBs
Position
757706..759601
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AA seq
631 aa
AA seq
DB search
MLRHVHQVKTLAEGKAIGPANDPSIARSWLRCLEQHQLDPSQPLTPSVLEHGHLLERRER
LQRVLEIASGEMNNLHLQLAGSAHAVLLTDARGVILNRVSAAAEQSTFEHAGLWLGADWS
EACEGTNGIGTCLVERQPLTIQQEEHFRSCHTGLTCSASPVFDPHGELLAVLDVSTLQDN
VSRQSQFHTMALVNLSAKVIESCYFLRRFENDWLLRFHLQAEYVGLFSEGLLAFDGEGRV
LAVNQTAINLLGGSRRELLGQSVESLFASRLDDLLALASEQPSASWPLRAQDGRMLFALL
RGRARRPVGAVPVVEAASPAVPASICLGDAALQQAFRRALRVIERDVPLLLHGETGSGKE
AFAKAVHQAGSRAERPFVALNCAAIPENLIESELFGYRGGSFTGARKEGMRGKLQQADGG
TLFLDEIGDMPLALQTRLLRVLDERQVVPIGGEPEPVDVRVISATHRDLRERVAAGLFRE
DLFYRLDGLAVTLPPLRERSDRGELIEHLLAREARGEAIRLEPAARQALLAYAWPGNVRQ
LRSVLRAQVALCEDGLIRLADLPADLRLAPVLPAPAPLETNGLLEQAERDALLAALEANH
WHVSRTAEQLGISRNTLYRKLQRHGIRREGD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgccatgttcatcaggtgaaaaccctggccgagggaaaggccatcggaccggcc
aacgatccctcgatcgcccgctcctggctgcgctgcctggagcagcaccagctcgacccg
tcgcagccgctgacgcccagcgtgctggagcacggtcacctgctggagcgccgcgagcgc
ctgcagcgggtgctggagatcgccagcggcgaaatgaacaacctccacctgcaactggcc
ggcagcgcccacgccgtgctgctgaccgatgcccgcggggtgatcctcaaccgcgtcagc
gccgccgccgagcagtcgaccttcgagcacgccggactctggctgggcgccgactggagc
gaggcctgcgagggcaccaacggcatcggcacctgcctagtcgagcgccagccgctgacc
atccagcaggaggaacacttccgcagttgccacaccggcctgacctgctcggccagcccg
gtgttcgacccgcacggcgaactgctcgcggtgctcgacgtctccacgctgcaggacaac
gtgtcgcggcagagccagttccacaccatggcgctggtcaacctctcggccaaggtgatc
gagagctgctatttcctgcgccgcttcgagaacgactggctgctgcgcttccacctgcag
gccgaatacgtcgggctgttcagcgaggggctgttggccttcgacggcgaagggcgggtg
ctggcggtcaaccagaccgccatcaacctgctcggcggcagccgccgcgaactgctcggc
cagtcggtcgaatcccttttcgcctcgcgcctggacgatttgctggctctggccagcgag
cagccgagcgccagttggccgctgcgcgcccaggatggccggatgctcttcgccctgcta
cgcggccgggcgcgccgtccggtgggcgcggtgccggtggtggaggccgcctcgcccgcg
gtgccggcgagcatctgcctgggcgatgccgcgttgcaacaggccttccgtcgtgcgctg
cgggtgatcgagcgcgacgtgccgctgttgctgcacggcgagacgggttccggcaaggag
gccttcgccaaggccgtgcaccaggccggcagccgtgccgagcggccgttcgtcgcgctg
aactgcgcggcgatcccggagaacctgatcgagagcgagctgttcggctaccgtggcggc
agtttcaccggcgcgcgcaaggagggcatgcgcggcaagttgcagcaggccgacggcggc
accctgttcctcgacgagatcggcgacatgccgctggcgctgcagacccgcctgttgcgc
gtgctcgacgagcgccaggtggtacccatcggcggcgagccggagccggtggacgttcgg
gtgatcagcgccacccaccgcgacctgcgcgagcgggtcgccgccgggctgttccgcgag
gacctgttctaccgcctggacggcctggcggtgaccctgccgccgctgcgcgagcggagc
gacaggggcgaactgatcgagcacctgctcgcccgcgaggcgcgcggcgaggcgatccgg
ctcgagccggcggcgcgccaggcactgctcgcctatgcctggccgggcaacgtgcgccag
ttgcgcagcgtgctgcgcgcccaggtggcgctctgcgaggatggcctgatccgtctggcc
gatctgccggcggatctgcgcctggccccggtactgccggcaccggcgccgctggaaacc
aacggcctcctggagcaggccgaacgcgatgccctgctggccgccctcgaagccaatcac
tggcacgtgagccgtaccgccgagcaactcggcatcagccgcaacaccctctaccgcaag
ctgcagcgccacggcatccgccgcgaaggcgactga
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