Azotobacter vinelandii CA6: AvCA6_08980
Help
Entry
AvCA6_08980 CDS
T02634
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd03030
DNA replication
avd03430
Mismatch repair
avd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AvCA6_08980 (holA)
03430 Mismatch repair
AvCA6_08980 (holA)
03440 Homologous recombination
AvCA6_08980 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avd03032
]
AvCA6_08980 (holA)
03400 DNA repair and recombination proteins [BR:
avd03400
]
AvCA6_08980 (holA)
Enzymes [BR:
avd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AvCA6_08980 (holA)
DNA replication proteins [BR:
avd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AvCA6_08980 (holA)
DNA repair and recombination proteins [BR:
avd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AvCA6_08980 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AGK18091
UniProt:
M9Y8A0
LinkDB
All DBs
Position
complement(846020..847060)
Genome browser
AA seq
346 aa
AA seq
DB search
MKLSSAQLPRQLKDSLAPVYVVSGDEPLLCQEACDAIRTAARAQGFSERQVFNADAGFDW
NQLHEAGASLSLFAEKRLLELRIANGKPGDKGAAAILEYLARPAEDNLLLIDLPKLDAAT
QKSKWAKALLDAPQVQFVQVWPVDAQQLPQWIRQRLAQAGLAASQEALELIAARVEGNLL
AAAQEIEKLKLLAENNQISADTVQAAVADSARFDVFGLLDAALAGQAAHALRMLEGLRGE
GVETPVILWALARELRQLAGLAQQYAQGVPLEKAFAQARPPIWEKRRPLLAKALQRYSAT
RWSQLLLDAQLIDAQIKGQAEGEPWNGLARLALAIAGQRLGLPPER
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctcttccgcgcaactacccagacagctcaaggacagcctggcaccggtctac
gtggtcagcggcgacgagccgctgctctgccaggaagcctgcgacgccatccgcaccgcc
gcccgtgcccagggcttcagcgagcgccaggtgttcaacgccgacgcaggcttcgactgg
aatcagctccacgaggccggcgccagcctgtcgctgttcgccgagaaacgcctgctggaa
ctgcgcatcgccaacggcaagcccggcgacaagggcgccgcggcgatcctcgaatacctg
gcccgccccgccgaggacaacctgctgctgatcgacctgcccaagctcgacgccgccacc
cagaagagcaagtgggccaaggcgctgctcgacgccccgcaggtgcagttcgtgcaggtc
tggccggtcgacgcccagcaactgccgcagtggatccgccagcgcctggcccaggccggg
ctggccgccagccaggaggcgctggaactgatcgccgcccgcgtcgaaggcaacctgctg
gccgccgcccaggaaatcgaaaagctcaagttgctcgccgagaacaatcagatcagtgcc
gataccgtgcaggccgcggtggccgacagcgcccgcttcgacgtcttcggcctgctcgac
gccgccctcgccggccaggccgcccatgccctgcgcatgctcgaaggactgcgcggcgaa
ggcgtggaaacgccggtgatcctctgggcgctggcccgcgaactgcgccagttggccggc
ctggcgcagcaatacgcccagggcgtgccgctggaaaaggccttcgcgcaggcgcgcccg
ccgatctgggaaaaacgccgtccgctgctggccaaggccctgcagcgctactcggcgaca
cgctggagccagttgctgctggacgcccaactgatcgacgcgcagatcaagggccaggcc
gaaggcgagccgtggaacggcctggcccggctggccctggccatcgccggccagcgcctg
ggcctgccgccggagcgctga
DBGET
integrated database retrieval system
