Azotobacter vinelandii CA6: AvCA6_11290
Help
Entry
AvCA6_11290 CDS
T02634
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AvCA6_11290 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avd03019
]
AvCA6_11290 (rhlB)
Enzymes [BR:
avd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AvCA6_11290 (rhlB)
Messenger RNA biogenesis [BR:
avd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AvCA6_11290 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AGK18663
UniProt:
M9YHS9
LinkDB
All DBs
Position
complement(1076186..1077751)
Genome browser
AA seq
521 aa
AA seq
DB search
MPAAQPFARLASCFTLAAIHSSSIDEITVLKALKKLLGMGEQAQPPVAADMPAPATRSTA
PAAPSKPPRQKTKPPRSEGKPAGRKIVADKPVGERKGAGKPQVGRPRREPPPDKPAAEWK
LEDFVVEPVPGKTRFHDFDLDPRLMHAIHDVGFPYCTPIQAQVLGYTLKGRDAIGRAQTG
TGKTAAFLISIISQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDALALTRYTGLNVM
SFVGGMDFDKQLKQLEEKFCDILVATPGRLLDFNQRGEVHLDMVEVLVLDEADRMLDMGF
IPQVRQIIRQTPYKGERQTLLFSATFTEDVMNLAKQWTVDPAIVEIEPEHVASDSVEQHV
YAVAGSDKYRLLYNLVTRNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKR
IKVLEGFREGRIRVLVATDVAGRGIHVEGVSHVINYTLPEDPDDYVHRIGRTGRAGSKGT
SISFAGEDDAFALPPIEALLGRKIDCEIPPAELLQPVPRRS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atcccggctgcgcagcccttcgcccgcctggcctcttgctttacactggcggcaatccat
tcctcatccatcgacgagataaccgtgctcaaggcactcaagaaacttctaggcatgggc
gaacaggcacaaccgcctgtcgccgccgacatgccagctcccgccacccgctccaccgct
cccgccgctccatccaagccgccccggcagaaaaccaagcccccccgcagcgaaggcaag
cccgccggcaggaaaatcgtcgccgacaagcccgtcggcgaacgcaagggcgccggcaag
ccccaggtcggacggccacggcgcgagccaccgccggacaagccggcggcggagtggaag
ctggaggacttcgtggtcgaacccgtgccgggcaagacccgtttccacgacttcgacctc
gacccgcggctgatgcacgccatccacgacgtcggcttcccctactgcacgccgatccag
gcccaggtgctcggctacaccctcaagggccgggacgccatcggccgcgcccagaccggc
accggcaagaccgcggccttcctgatctcgatcatcagccagttgctgcagaccccgccg
cccaaggagcgctacatgggcgagccgcgcgcgctgatcatcgcgccgacccgcgagctg
gtggtgcagatcgccaaggatgccctggcgctgacccgctacaccggcctcaacgtgatg
agcttcgtcggcggcatggacttcgacaagcagctcaagcaactggaggagaagttctgc
gacatcctggtggccacccccggccgcctgctggacttcaaccagcgcggcgaggtgcat
ctggacatggtcgaggtgctggtgctggacgaggccgaccgcatgctcgacatgggcttc
attccgcaggtgcggcagatcatccgccagaccccgtacaagggcgaacggcagaccctg
ctgttctcggcgaccttcaccgaggacgtgatgaacctggccaagcagtggacggtcgat
ccggcgatcgtcgagatcgaaccggagcatgtcgccagcgacagcgtcgagcagcacgtc
tacgcggtggccggcagcgacaagtaccggctgctgtacaacctggtgacccgcaacaac
tgggaacgggtgatggtgttcgccaaccgcaaggacgaggtgcggcgcatcgaggagcgc
ctgaccaaggacggcatcagcgccgcgcagatgtccggcgacgtgccgcagcacaagcgc
atcaaggtcctggaaggcttccgcgagggccgcatccgcgtgttggtggccaccgacgtg
gccggccgcggcatccatgtcgagggtgtcagccacgtgatcaactacaccctgccggaa
gatccggacgactacgtgcaccgcatcggccgcaccggccgggccggctccaaaggcacc
tcgatcagcttcgccggcgaggacgacgccttcgccctgccaccgatcgaggcgctgctc
gggcgcaagatcgactgcgagatcccgcccgccgaactgctccagccggtgccgcggcgc
tcctga
DBGET
integrated database retrieval system
