Azotobacter vinelandii CA6: AvCA6_15920
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Entry
AvCA6_15920 CDS
T02634
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
avd
Azotobacter vinelandii CA6
Pathway
avd00521
Streptomycin biosynthesis
avd00523
Polyketide sugar unit biosynthesis
avd00525
Acarbose and validamycin biosynthesis
avd00541
Biosynthesis of various nucleotide sugars
avd01055
Biosynthesis of vancomycin group antibiotics
avd01100
Metabolic pathways
avd01110
Biosynthesis of secondary metabolites
avd01250
Biosynthesis of nucleotide sugars
Module
avd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AvCA6_15920 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AvCA6_15920 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AvCA6_15920 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AvCA6_15920 (rfbB)
00525 Acarbose and validamycin biosynthesis
AvCA6_15920 (rfbB)
Enzymes [BR:
avd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AvCA6_15920 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGK18654
UniProt:
M9YDU2
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Position
1567762..1568817
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AA seq
351 aa
AA seq
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MTILVTGSAGFIGANFVLDWLHQHDEAVVSLDKLTYAGNLANLKSLEGDDRHVFVKGDIG
DSKLVAGLLAEYQPRAVVNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEAVRVYHAQLHD
GAAAFRFLHVSTDEVYGSLEPTDPAFTERNRYEPNSPYSASKAASDHLVRAYHHTYKLPV
LTTNCSNNYGPYHFPEKLIPLIIHNALSGKPLPIYGDGQQVRDWLYVKDHCSAVRRVLEA
GKLGETYNVGGWNEKTNLDVVHTLCDILDQERPRGDGRSYREQITFVKDRPGHDRRYAID
ATKLERDLGWKPAETFESGIRKTVRWYLDNQGWVENITSGAYRDWVSKHYQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgactattctggtaacaggcagcgcaggcttcatcggggcgaactttgtcctggactgg
ctgcaccagcatgacgaggcggttgtcagcctggataagctgacttatgccggtaatctg
gccaatctgaaaagcctggaaggcgatgaccgacatgtcttcgtcaagggcgatataggc
gattcgaagctggtcgccgggcttctggcggaataccagccgcgggccgtcgtcaatttt
gcggcggagtcccatgtggatcgctcgattcacggtccggaagactttatccagaccaac
atcgtgggaaccttccggctactcgaagccgtacgtgtctatcatgctcaactgcatgat
ggtgccgctgctttccgtttcctgcatgtctcgacggacgaagtatacggctcgctggag
cccaccgacccggcgttcaccgagcggaaccgctacgaaccgaacagtccctactcggcc
tccaaggccgcttctgaccatctggttcgagcctatcaccatacttataagctgccggtg
ttgaccaccaactgctcgaataattatggaccgtatcatttcccggaaaagctcatcccg
ctgatcattcacaacgcattgtcaggcaagcccctgcccatttacggcgatggccagcaa
gtccgtgactggctgtacgtgaaagaccattgcagcgcggttcgccgggtgctggaagcg
gggaaactgggtgaaacctataacgtcggaggatggaacgaaaagaccaacctcgatgtg
gtgcataccctttgcgatatcctcgaccaggagcggccgcgtggcgacggccggagctat
cgcgagcaaatcaccttcgtcaaggatcgtcccggacacgatcgtcgctatgccatcgac
gcgaccaagctcgagcgcgatctgggctggaaaccggcggaaactttcgaaagcggcatt
cgcaagaccgttcgctggtatctggacaaccagggctgggtcgaaaatatcaccagcggt
gcttaccgcgactgggtgagcaaacactaccaatga
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