Azotobacter vinelandii CA6: AvCA6_37650
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Entry
AvCA6_37650 CDS
T02634
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
avd
Azotobacter vinelandii CA6
Brite
KEGG Orthology (KO) [BR:
avd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avd03009
]
AvCA6_37650 (rimO)
Enzymes [BR:
avd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AvCA6_37650 (rimO)
Ribosome biogenesis [BR:
avd03009
]
Prokaryotic type
ribosomal protein modification factors
AvCA6_37650 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
CLP1_P
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AGK18674
UniProt:
M9YDW0
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All DBs
Position
3810536..3811858
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AA seq
440 aa
AA seq
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MSKEVPSIGWVSLGCPKATVDSERILTQLRTEGYRIVPSYEEADVVVVNTCGFIDSAKAE
SLDAIGEALAENGKVIVTGCMGVSEEAIRNVHPSVLAVTGPQQYEQVVSAVHEVAPPKAD
HDPFVDLVPPQGIRLTPRHYAYLKISEGCNHSCAFCIIPSMRGKLVSRPAGEVLGEAERL
VGAGVQELLVIAQDTSAYGVDLRYRTDFWNGRPVKTRLLELCEELGRMGVWVRLHYVYPY
PSVDELIPLMAAGKILPYLDIPLQHASPKILKAMKRPAFEDQTLARIRKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLSEAQLDRVGCFQYSAVDGAPANELEGAVAEEVKQERWE
RFMAHQQAISAARLQRRIGQEIEVLIDEVDEQGAVGRSWADAPEIDGNVYVDSAQVLKPG
DKVRVRVTDADEYDLWAETL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaagttcctagcataggttgggtgtcgctcgggtgcccgaaggccaccgtc
gactccgaacgcatcctcacccagttgcgcacggagggttaccggatcgtaccgtcctac
gaggaggccgacgtggtggtggtcaacacctgcggcttcatcgacagcgccaaggccgag
tccctcgatgccatcggcgaggccctggcggaaaatggcaaggtgatcgtcaccggctgc
atgggcgtatccgaggaagccatccgcaacgtgcatcccagcgtgctggcggtcaccggc
ccgcagcagtacgagcaggtggtcagcgccgtgcacgaggtggcgccgccgaaggccgac
cacgatcccttcgtcgatctggtgccgccgcagggcatcaggctgaccccgcgccactac
gcctacctgaagatatccgaaggctgcaaccacagttgcgccttctgcatcatcccgtcc
atgcgcggcaaactggtcagccgcccggcgggcgaggtgctgggcgaggccgagcgtctg
gtcggggccggcgtccaggagctcctggtgatcgcccaggacaccagcgcctacggcgtc
gacctcaggtaccggaccgacttctggaacggccggccggtgaagacgcgtctgctcgaa
ctgtgcgaggaactcggcaggatgggcgtctgggtgcgtctgcactacgtctacccctac
cccagcgtcgacgagctgatcccgctgatggccgccggcaagatactgccctacctggac
atccccctccagcacgccagcccgaagatcctcaaggcgatgaaacgtccggccttcgag
gaccagaccctcgcgcgcatcaggaaatggcgggagatctgtccggagctgaccatccgc
tcgaccttcatcgtcggcttccccggcgagaccgaggaggacttccagtacctgctcgac
tggctgagcgaggcccagctcgaccgcgtcggctgcttccagtattcggcggtggatggc
gcaccggccaacgaactggaaggcgcggtagcggaagaggtcaagcaggaacgctgggag
cgcttcatggcccaccagcaggcgatcagcgcggcgcgcctgcaacgccggatcggccag
gagatcgaggtgctgatcgacgaggtcgacgagcagggtgccgtcggccgctcctgggcc
gacgccccggagatcgacggcaatgtctacgtcgacagtgcacaggtgctcaaacccggt
gacaaggtgcgcgtgcgcgtcaccgatgccgatgagtacgatctctgggccgaaaccctc
tga
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